Expose elevation for parset

compress_pipeline.cwl

@@ -16,6 +16,8 @@ inputs:
   type: boolean?
 - id: msin
   type: Directory
+- id: flag_elevation
+  type: string?
 
 outputs:
 - id: inspect
@@ -167,6 +169,8 @@ steps:
     source: flag_autocorrelation
   - id: is_raw
     source: identify_issues/is_raw
+  - id: flag_elevation
+    source: flag_elevation
   run: steps/define_parset.cwl
   out:
   - id: output

download_and_compress_pipeline.cwl

@@ -17,6 +17,8 @@ inputs:
   type: string[]
 - id: is_long_baseline
   type: boolean?
+- id: flag_elevation
+  type: string?
 
 outputs:
 - id: compressed
@@ -67,6 +69,8 @@ steps:
     source: flag_autocorrelation
   - id: is_long_baseline
     source: is_long_baseline
+  - id: flag_elevation
+    source: flag_elevation
   scatter:
   - msin
   run: ./compress_pipeline.cwl

steps/define_parset.cwl

@@ -22,7 +22,7 @@ requirements:
       aoflag.strategy=/usr/local/share/aoflagger/strategies/lofar-default.lua
       #
       flagelev.type=preflagger
-      flagelev.elevation=0deg..20deg
+      flagelev.elevation=$(inputs.flag_elevation)
       #
       flagamp.amplmin=1e-30
       flagamp.type=preflagger
@@ -35,6 +35,9 @@ inputs:
 - id: is_raw
   type: boolean
   default: true
+- id: flag_elevation
+  type: string
+  default: '0deg..20deg'
 
 outputs:
 - id: output