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LDV
imaging_compress_pipeline
Commits
3b7dc4a4
Commit
3b7dc4a4
authored
4 years ago
by
Mattia Mancini
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Fix input
parent
c5e2c7c6
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Changes
1
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1 changed file
compress_pipeline.cwl
+32
-24
32 additions, 24 deletions
compress_pipeline.cwl
with
32 additions
and
24 deletions
compress_pipeline.cwl
+
32
−
24
View file @
3b7dc4a4
...
@@ -9,39 +9,44 @@ inputs:
...
@@ -9,39 +9,44 @@ inputs:
type: boolean?
type: boolean?
'sbg:x': -41
'sbg:x': -41
'sbg:y': -212
'sbg:y': -212
- id: surl
- id: surl
s
type: string
type:
'
string
[]'
'sbg:x': -229
'sbg:x': -229
'sbg:y': -29
'sbg:y': -29
outputs:
outputs:
- id:
ms
out
- id: out
put
outputSource:
outputSource:
- dppp/msout
- inspect_flagging_dataloss/output
type: Directory
type: File[]
doc: Output Measurement Set
'sbg:x': 568.6015625
'sbg:x': 756.0812377929688
'sbg:y': 213.5
'sbg:y': -155.634521484375
- id: logfile
- id: logfile
outputSource:
outputSource:
- dppp/logfile
- dppp/logfile
type: 'File[]'
type:
'sbg:x': 893.7462158203125
type: array
'sbg:y': 91.7055892944336
items:
- id: flagging_metrics
type: array
items: File
'sbg:x': 682.6015625
'sbg:y': 48.5
- id: msout
outputSource:
outputSource:
-
inspect_flagging_dataloss/outp
ut
-
dppp/mso
ut
type:
File
type:
Directory[]
'sbg:x':
581
.6015625
'sbg:x':
738
.6015625
'sbg:y':
217
'sbg:y':
-130.5
steps:
steps:
- id: surl_copy
- id: surl_copy
in:
in:
- id: surl
- id: surl
source: surl
source: surl
s
out:
out:
- id: output
- id: output
run: steps/surl_copy.cwl
run: steps/surl_copy.cwl
label: surl_copy
label: surl_copy
scatter:
- surl
'sbg:x': 14
'sbg:x': 14
'sbg:y': -28
'sbg:y': -28
- id: untar
- id: untar
...
@@ -52,6 +57,8 @@ steps:
...
@@ -52,6 +57,8 @@ steps:
- id: uncompressed
- id: uncompressed
run: steps/untar.cwl
run: steps/untar.cwl
label: untar
label: untar
scatter:
- tar_file
'sbg:x': 173
'sbg:x': 173
'sbg:y': -28
'sbg:y': -28
- id: dppp
- id: dppp
...
@@ -73,6 +80,8 @@ steps:
...
@@ -73,6 +80,8 @@ steps:
- id: msout
- id: msout
- id: logfile
- id: logfile
run: steps/DPPP.cwl
run: steps/DPPP.cwl
scatter:
- msin
'sbg:x': 471
'sbg:x': 471
'sbg:y': -75
'sbg:y': -75
- id: define_parset
- id: define_parset
...
@@ -93,10 +102,9 @@ steps:
...
@@ -93,10 +102,9 @@ steps:
- id: output
- id: output
run: steps/inspect_flagging_dataloss.cwl
run: steps/inspect_flagging_dataloss.cwl
label: inspect_flagging_dataloss
label: inspect_flagging_dataloss
'sbg:x': 362
scatter:
'sbg:y': 91
- input
'sbg:x': 397
'sbg:y': 132
requirements:
requirements:
- class: StepInputExpressionRequirement
- class: ScatterFeatureRequirement
- class: InlineJavascriptRequirement
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