RAP-840 Add Read the Docs
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- Mick Veldhuis authored
+ 7
− 3
@@ -30,14 +30,16 @@ Since the Pre-Processing Pipeline is running inside a container, do not forgot t
Running the pipeline without the ``--no-container`` option will always attempt to run the steps inside their respective (Docker) container. Make sure to mount the output and log directories, specified by ``--outdir`` and ``--log-dir``, when running the pipeline inside a container to ensure the files are not lost after execution.
@@ -55,6 +57,8 @@ Similarly, these options might be of interest when using ``toil``: