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Commit bb17776d authored by Mattia Mancini's avatar Mattia Mancini
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Add missing steps

Former-commit-id: 05f24f65
parent 844047a9
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......@@ -41,6 +41,18 @@ outputs:
type: Directory
'sbg:x': 224.60113525390625
'sbg:y': 130
- id: logfile
outputSource:
- dppp/logfile
type: 'File[]'
'sbg:x': 185.1875
'sbg:y': 334.5
- id: parset
outputSource:
- generic_step/parset
type: File
'sbg:x': 11.1875
'sbg:y': -299.5
steps:
- id: generic_step
in:
......
#!/usr/bin/env cwl-runner
class: Workflow
cwlVersion: v1.0
$namespaces:
sbg: 'https://www.sevenbridges.com/'
id: dp3-filter-step-generator
inputs:
- id: steps
type: Any[]?
default: []
- id: step_name
type: string
doc: unique name for the step
default: filter
- id: baseline
type: string
doc: baseline to keeps
- id: remove
type: boolean
doc: Remove or flag
outputs:
- id: augmented_steps
outputSource:
- DP3_GenericStep/augmented_steps
type: Any[]
steps:
- id: DP3_GenericStep
in:
- id: steps
source: steps
- id: parameters
valueFrom: $(inputs)
- id: step_id
source: step_name
- id: step_type
default: 'filter'
- id: baseline
source: baseline
- id: remove
source: remove
out:
- augmented_steps
run: ../steps/DP3.GenericStep.cwl
requirements:
- class: StepInputExpressionRequirement
- class: InlineJavascriptRequirement
- class: MultipleInputFeatureRequirement
\ No newline at end of file
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