Skip to content
GitLab
Explore
Sign in
Register
Primary navigation
Search or go to…
Project
LINC
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Iterations
Wiki
Requirements
Jira
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Locked files
Build
Pipelines
Jobs
Pipeline schedules
Test cases
Artifacts
Deploy
Releases
Container Registry
Model registry
Operate
Environments
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Code review analytics
Issue analytics
Insights
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
ResearchAndDevelopment
LINC
Commits
05f24f65
Commit
05f24f65
authored
4 years ago
by
Mattia Mancini
Browse files
Options
Downloads
Patches
Plain Diff
Add missing steps
parent
afa73682
No related branches found
No related tags found
2 merge requests
!69
Change the name of the pre-calibrated output MS
,
!20
Merge request HBA_calibrator to master
Pipeline
#1997
failed
4 years ago
Stage: validate_cwl_scripts
Stage: test_steps
Stage: integration_test
Changes
2
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
Showing
2 changed files
lofar-cwl/steps/DP3.Execute.cwl
+12
-0
12 additions, 0 deletions
lofar-cwl/steps/DP3.Execute.cwl
lofar-cwl/steps/DP3.FilterStepGenerator.cwl
+50
-0
50 additions, 0 deletions
lofar-cwl/steps/DP3.FilterStepGenerator.cwl
with
62 additions
and
0 deletions
lofar-cwl/steps/DP3.Execute.cwl
+
12
−
0
View file @
05f24f65
...
...
@@ -41,6 +41,18 @@ outputs:
type: Directory
'sbg:x': 224.60113525390625
'sbg:y': 130
- id: logfile
outputSource:
- dppp/logfile
type: 'File[]'
'sbg:x': 185.1875
'sbg:y': 334.5
- id: parset
outputSource:
- generic_step/parset
type: File
'sbg:x': 11.1875
'sbg:y': -299.5
steps:
- id: generic_step
in:
...
...
This diff is collapsed.
Click to expand it.
lofar-cwl/steps/DP3.FilterStepGenerator.cwl
0 → 100644
+
50
−
0
View file @
05f24f65
#!/usr/bin/env cwl-runner
class: Workflow
cwlVersion: v1.0
$namespaces:
sbg: 'https://www.sevenbridges.com/'
id: dp3-filter-step-generator
inputs:
- id: steps
type: Any[]?
default: []
- id: step_name
type: string
doc: unique name for the step
default: filter
- id: baseline
type: string
doc: baseline to keeps
- id: remove
type: boolean
doc: Remove or flag
outputs:
- id: augmented_steps
outputSource:
- DP3_GenericStep/augmented_steps
type: Any[]
steps:
- id: DP3_GenericStep
in:
- id: steps
source: steps
- id: parameters
valueFrom: $(inputs)
- id: step_id
source: step_name
- id: step_type
default: 'filter'
- id: baseline
source: baseline
- id: remove
source: remove
out:
- augmented_steps
run: ../steps/DP3.GenericStep.cwl
requirements:
- class: StepInputExpressionRequirement
- class: InlineJavascriptRequirement
- class: MultipleInputFeatureRequirement
\ No newline at end of file
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment