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Commit a68a261c authored by Mattia Mancini's avatar Mattia Mancini
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Interpolate inplace

Former-commit-id: a5c95d18
parent bc2f67e9
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...@@ -3,24 +3,19 @@ cwlVersion: v1.0 ...@@ -3,24 +3,19 @@ cwlVersion: v1.0
$namespaces: $namespaces:
sbg: 'https://www.sevenbridges.com/' sbg: 'https://www.sevenbridges.com/'
id: interpolate_visibilities id: interpolate_visibilities
baseCommand: baseCommand:
- DPPP - DPPP
arguments: arguments:
- msout.datacolumn=INTERP_DATA - msout.datacolumn=INTERP_DATA
- msin.datacolumn=DATA - msin.datacolumn=DATA
- steps=[interpolate] - steps=[interpolate]
inputs: inputs:
- id: msin - id: msin
type: Directory type: Directory
inputBinding: inputBinding:
prefix: 'msin=' prefix: 'msin='
separate: false separate: false
- id: msout_name
default: out.MS
type: string
inputBinding:
prefix: 'msout='
separate: false
- id: storage_manager - id: storage_manager
type: string type: string
default: Dysco default: Dysco
...@@ -39,12 +34,18 @@ inputs: ...@@ -39,12 +34,18 @@ inputs:
prefix: 'interpolate.windowsize=' prefix: 'interpolate.windowsize='
separate: false separate: false
outputs: outputs:
- id: msout - id: msout
type: Directory type: Directory
outputBinding: outputBinding:
glob: $(inputs.msout_name) glob: $(inputs.msin)
label: interpolate_visibilities label: interpolate_visibilities
hints: hints:
- class: DockerRequirement - class: DockerRequirement
dockerPull: lofar/lofar-pipeline dockerPull: lofar/lofar-pipeline
requirements:
- class: InitialWorkDirRequirement
listing:
- entry: $(inputs.msin)
writable: true
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