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Commit 00188da7 authored by Mattia Mancini's avatar Mattia Mancini
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Add DP3 Execute step

Former-commit-id: 2ae53658
parent 2f4b5985
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class: Workflow
cwlVersion: v1.0
id: dp3_execute
label: DP3.Execute
$namespaces:
sbg: 'https://www.sevenbridges.com/'
inputs:
- id: msout_name
type: string
'sbg:x': -425.39886474609375
'sbg:y': 127
- id: msin
type: Directory?
'sbg:x': -254.39886474609375
'sbg:y': 242
- id: steps
type: 'Any[]?'
'sbg:x': -518.3988647460938
'sbg:y': -88
outputs:
- id: secondary_output_files
outputSource:
- dppp/secondary_output_files
type: Any
'sbg:x': 213.60113525390625
'sbg:y': -184
- id: secondary_output_directories
outputSource:
- dppp/secondary_output_directories
type: Any
'sbg:x': 248.60113525390625
'sbg:y': -47
- id: msout
outputSource:
- dppp/msout
type: Directory
'sbg:x': 224.60113525390625
'sbg:y': 130
steps:
- id: generic_step
in:
- id: steps
source:
- steps
out:
- id: parset
- id: input_files
- id: input_directories
- id: output_file_names
- id: output_directory_names
run: ./DP3.ParsetGenerator.cwl
'sbg:x': -294
'sbg:y': -84
- id: dppp
in:
- id: parset
source: generic_step/parset
- id: msin
source: msin
- id: msout_name
source: msout_name
- id: secondary_files
source:
- generic_step/input_files
- id: secondary_directories
source:
- generic_step/input_directories
- id: output_file_names
source: generic_step/output_file_names
- id: output_directory_names
source: generic_step/output_directory_names
out:
- id: msout
- id: secondary_output_files
- id: secondary_output_directories
run: ./DPPP.cwl
'sbg:x': 26
'sbg:y': -46
requirements: []
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