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Marcel Loose authoredCWL v1.2 is more explicit about the way that strings in embedded code that contain a dollar sign ($) must be escaped. See https://www.commonwl.org/v1.2/Workflow.html#String_interpolation. It turned out that a few workflow steps contained inline Bash code with improperly escaped variables references. This has been fixed.
Marcel Loose authoredCWL v1.2 is more explicit about the way that strings in embedded code that contain a dollar sign ($) must be escaped. See https://www.commonwl.org/v1.2/Workflow.html#String_interpolation. It turned out that a few workflow steps contained inline Bash code with improperly escaped variables references. This has been fixed.
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