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siplib.py

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    uvplot.cwl 1.76 KiB
    class: CommandLineTool
    cwlVersion: v1.2
    $namespaces:
      lofar: 'https://git.astron.nl/eosc/ontologies/raw/master/schema/lofar.owl'
    id: uvplot
    baseCommand:
      - plot_uvcov.py
    inputs:
      - id: MSfiles
        type:
          - Directory[]
          - Directory
        inputBinding:
          position: 2
          shellQuote: false
        doc: List of MS for UV-plotting
      - id: output_name
        type: string?
        default: 'uv-coverage.png'
        inputBinding:
          position: 1
          prefix: '--output'
          shellQuote: false
        doc: Name of the output image
      - id: title
        default: 'uv-coverage'
        type: string?
        inputBinding:
          position: 1
          prefix: '--title'
          shellQuote: false
        doc: Title of the plots
      - id: limits
        default: ',,,'
        type: string?
        inputBinding:
          position: 1
          prefix: '--limits'
          shellQuote: false
      - id: timeslots
        default: '0,10,0'
        type: string?
        inputBinding:
          position: 1
          prefix: '--timeslots'
          shellQuote: false
      - id: antennas
        default: '-1'
        type: string?
        inputBinding:
          position: 1
          prefix: '--antennas'
          shellQuote: false
      - id: wideband
        default: true
        type: boolean?
        inputBinding:
          position: 0
          prefix: '--wideband True'
          shellQuote: false
    outputs:
      - id: output_image
        doc: Plot of the uv-coverage
        type: File[]
        outputBinding:
          glob: "*$(inputs.output_name.split('.').pop())"
      - id: logfile
        type: File[]
        outputBinding:
          glob: 'uvplot*.log'
    label: uvplot
    hints:
      - class: DockerRequirement
        dockerPull: astronrd/linc:v4.0-42-gf3198f7
    requirements:
      - class: ShellCommandRequirement
      - class: InlineJavascriptRequirement
    stdout: uvplot.log
    stderr: uvplot_err.log
    $schema:
      - 'https://git.astron.nl/eosc/ontologies/raw/master/schema/lofar.owl'