SSB-47: add dysco support

CAL/Docker/HolographyBase/Dockerfile

@@ -15,7 +15,10 @@ RUN apt-get update && apt-get -y install \
    python3-emcee \
    python3-numba \
    libfftw3-bin \
-   libboost-python1.65.1
+   libboost-python1.65.1 \
+   gsl-bin \ 
+   libhdf5-100 \
+   libopenblas-base
 
 RUN pip3 install dataclasses \
                  scipy
@@ -69,9 +72,27 @@ RUN mkdir -p /root/src/python-casacore && \
     python3 setup.py install --prefix=/opt/python-casacore
 
 ## DEALING WITH DYSCO
-RUN apt install -y dysco-dev
+#
+# *******************
+#   DYSCO
+# *******************
+#
+# Run-time dependencies
+RUN apt install -y doxygen  libboost-date-time-dev libopenblas-dev libgsl-dev
+RUN mkdir /root/src/dysco && \
+    cd /root/src/dysco && \
+    wget https://github.com/aroffringa/dysco/archive/v1.2.tar.gz && \
+    tar -xvf v1.2.tar.gz && \
+    rm v1.2.tar.gz && \
+    mkdir build && \
+    cd build  && \
+    cmake -DCMAKE_CXX_FLAGS="${CXX_FLAGS}" -DPORTABLE=True -DCMAKE_INSTALL_PREFIX=/opt/dysco/ -DCASACORE_ROOT_DIR=/opt/casacore/ /root/src/dysco/dysco-1.2 && \
+    make -j 5 && \
+    make install
 
 FROM base 
+ENV PYTHONPATH=/opt/dysco/lib/python3.6/site-packages:/opt/dysco/lib64/python3.6/site-packages:${PYTHONPATH}
 COPY --from=base-build /opt/casacore/ /opt/casacore/
 COPY --from=base-build /opt/python-casacore/ /opt/python-casacore/
+COPY --from=base-build /opt/dysco/ /opt/dysco/
 

CAL/Docker/HolographyDeploy/Dockerfile

@@ -3,11 +3,12 @@ COPY --from=holography-build:latest /opt/lofar  /opt/lofar
 
 COPY ./entrypoint.sh /entrypoint.sh
 
-ENV LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/casacore/lib/
+ENV LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/casacore/lib/:/opt/dysco/lib
 
-ENV PYTHONPATH=/opt/python-casacore/lib/python3.6/site-packages/
+ENV PYTHONPATH=$PYTHONPATH:/opt/python-casacore/lib/python3.6/site-packages/
 
 RUN mkdir /WORKDIR && chmod 777 /WORKDIR
 WORKDIR /WORKDIR
+
 RUN chmod 777 /entrypoint.sh
 ENTRYPOINT ["/entrypoint.sh"]