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EOSC
SlurmExecutorPlugin
Commits
6aa152a1
Commit
6aa152a1
authored
5 years ago
by
Mattia Mancini
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code refactor
parent
78180d5f
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Changes
2
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2 changed files
lib/slurm_cli/slurm_control.py
+39
-8
39 additions, 8 deletions
lib/slurm_cli/slurm_control.py
lib/slurm_executor/slurm.py
+3
-2
3 additions, 2 deletions
lib/slurm_executor/slurm.py
with
42 additions
and
10 deletions
lib/slurm_cli/slurm_control.py
+
39
−
8
View file @
6aa152a1
from
typing
import
List
,
Tuple
,
Union
from
typing
import
List
,
Tuple
,
Union
,
Dict
from
.jobs
import
SlurmJobStatus
from
.jobs
import
SlurmJobStatus
import
subprocess
from
subprocess
import
run
as
run_process
__SQUEUE_PATH
=
'
squeue
'
__SRUN_PATH
=
'
srun
'
class
EmptyListException
(
Exception
):
class
EmptyListException
(
Exception
):
...
@@ -21,8 +24,8 @@ def __list_contains_valid_ids(ids_list):
...
@@ -21,8 +24,8 @@ def __list_contains_valid_ids(ids_list):
raise
EmptyListException
()
raise
EmptyListException
()
def
slurm
_get_processes_status
(
job_ids
:
Union
[
List
,
Tuple
]
=
()):
def
__compose
_get_processes_status
_cmd
(
job_ids
:
Union
[
List
,
Tuple
]
=
()):
cmd
=
[
'
squeue
'
,
'
--states=all
'
,
'
-h
'
]
cmd
=
[
'
--states=all
'
,
'
-h
'
]
fmt
=
'
%i;%j;%t;%T;%r
'
fmt
=
'
%i;%j;%t;%T;%r
'
cmd
+=
[
'
--format=%s
'
%
fmt
]
cmd
+=
[
'
--format=%s
'
%
fmt
]
if
job_ids
:
if
job_ids
:
...
@@ -30,13 +33,30 @@ def slurm_get_processes_status(job_ids: Union[List, Tuple] = ()):
...
@@ -30,13 +33,30 @@ def slurm_get_processes_status(job_ids: Union[List, Tuple] = ()):
else
:
else
:
cmd
+=
[
'
-a
'
]
cmd
+=
[
'
-a
'
]
process_status
=
subprocess
.
run
(
cmd
)
return
cmd
def
__execute_squeue
(
args
):
process_status
=
run_process
([
__SQUEUE_PATH
]
+
args
)
if
process_status
.
returncode
>
0
:
if
process_status
.
returncode
>
0
:
raise
SlurmCallError
()
raise
SlurmCallError
()
output
=
process_status
.
stdout
output
=
process_status
.
stdout
return
output
def
__parse_squeue_output
(
squeue_output
)
->
List
[
SlurmJobStatus
]:
'''
Parses the output of squeue
e.g.
123;test_job;CD;COMPLETED;None
:param squeue_output:
:return:
'''
jobs_found
=
[]
jobs_found
=
[]
if
process_status
.
stdout
:
if
squeue_output
:
for
line
in
output
.
split
(
'
\n
'
):
for
line
in
squeue_output
.
split
(
'
\n
'
):
if
not
line
:
continue
job_id
,
job_name
,
status_code
,
status
,
reason
=
line
.
split
(
'
;
'
)
job_id
,
job_name
,
status_code
,
status
,
reason
=
line
.
split
(
'
;
'
)
jobs_found
.
append
(
SlurmJobStatus
(
job_id
=
job_id
,
jobs_found
.
append
(
SlurmJobStatus
(
job_id
=
job_id
,
job_name
=
job_name
,
job_name
=
job_name
,
...
@@ -45,3 +65,14 @@ def slurm_get_processes_status(job_ids: Union[List, Tuple] = ()):
...
@@ -45,3 +65,14 @@ def slurm_get_processes_status(job_ids: Union[List, Tuple] = ()):
reason
=
reason
))
reason
=
reason
))
return
jobs_found
return
jobs_found
def
__map_job_status_per_jobid
(
job_status_list
:
List
[
SlurmJobStatus
])
->
Dict
[
str
,
SlurmJobStatus
]:
return
{
job_status
.
job_id
:
job_status
for
job_status
in
job_status_list
}
def
get_jobs_status
(
job_ids
:
Union
[
List
,
Tuple
]
=
()):
args
=
__compose_get_processes_status_cmd
(
job_ids
)
output
=
__execute_squeue
(
args
)
parsed_output
=
__parse_squeue_output
(
output
)
return
__map_job_status_per_jobid
(
parsed_output
)
\ No newline at end of file
This diff is collapsed.
Click to expand it.
lib/slurm_executor/slurm.py
+
3
−
2
View file @
6aa152a1
from
airflow.plugins_manager
import
AirflowPlugin
from
airflow.plugins_manager
import
AirflowPlugin
from
airflow.executors.base_executor
import
BaseExecutor
from
airflow.executors.base_executor
import
BaseExecutor
from
airflow.utils.state
import
State
from
airflow.utils.state
import
State
from
slurm_cli.slurm_control
import
get_jobs_status
import
subprocess
import
subprocess
# Will show up under airflow.executors.slurm.SlurmExecutor
# Will show up under airflow.executors.slurm.SlurmExecutor
...
@@ -40,5 +41,5 @@ class SlurmExecutorPlugin(AirflowPlugin):
...
@@ -40,5 +41,5 @@ class SlurmExecutorPlugin(AirflowPlugin):
import
sys
import
sys
if
__name__
==
'
__main__
'
:
if
__name__
==
'
__main__
'
:
print
(
'
output
'
,
_slurm_get_processe
s_status
())
print
(
'
output
'
,
get_job
s_status
())
print
(
'
output
'
,
_slurm_get_processe
s_status
(
sys
.
argv
[
1
:]))
print
(
'
output
'
,
get_job
s_status
(
sys
.
argv
[
1
:]))
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