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Commit 8bb035a2 authored by Mattia Mancini's avatar Mattia Mancini
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Remove unnecessary files

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......@@ -153,12 +153,6 @@ h5parm_collector:
script:
- cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH steps/H5ParmCollector.cwl test_jobs/h5parm_collector.json
blsmooth:
stage: test_steps
allow_failure: true
script:
- cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH steps/blsmooth.cwl test_jobs/blsmooth.json
ddecal:
stage: test_steps
allow_failure: true
......
class: CommandLineTool
cwlVersion: v1.0
id: blsmooth
label: BLsmooth
baseCommand:
- BLsmooth.py
inputs:
- id: msin
type: Directory
inputBinding:
position: 1
doc: Input measurement set
- default: 0.2
id: ionfactor
type: float
inputBinding:
position: 0
prefix: '-f'
doc: Gives an indication on how strong is the ionosphere
- id: do_smooth
type: boolean
doc: 'If true performs smoothing'
inputBinding:
prefix: '--smooth=SMOOTH'
- default: 0.5
id: bscalefactor
type: float
inputBinding:
position: 0
prefix: '-s'
doc: Gives an indication on how the smoothing varies with
- default: DATA
id: in_column_name
type: string
inputBinding:
position: 0
prefix: '-i'
doc: Column name to smooth
- default: SMOOTHED_DATA
id: out_column
type: string
inputBinding:
position: 0
prefix: '-o'
doc: Output column
- default: false
id: weight
type: boolean
inputBinding:
position: 0
prefix: '-w'
doc: >-
Save the newly computed WEIGHT_SPECTRUM, this action permanently modify
the MS!
- default: false
id: restore
type: boolean
inputBinding:
position: 0
prefix: '-r'
doc: If WEIGHT_SPECTRUM_ORIG exists then restore it before smoothing
- default: false
id: nobackup
type: boolean
inputBinding:
position: 0
prefix: '-b'
doc: Do not backup the old WEIGHT_SPECTRUM in WEIGHT_SPECTRUM_ORIG
- default: false
id: onlyamp
type: boolean
inputBinding:
position: 0
prefix: '-a'
doc: Smooth only amplitudes
outputs:
- id: msout
doc: MS set output
type: Directory
outputBinding:
glob: $(inputs.msin.basename)
hints:
- class: DockerRequirement
dockerPull: lofareosc/prefactor-ci:master
requirements:
- class: InitialWorkDirRequirement
listing:
- entry: $(inputs.msin)
writable: true
- class: InlineJavascriptRequirement
{
"msin": {
"class": "Directory",
"path": "/data/L570745_SB003_uv_first10.MS"
},
"do_smooth": true
}
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