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serializers.py
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aggregate_and_plot.py 1.23 KiB
#!/usr/bin/env python3
from lofar_quality.manipulate.common import join_inspect_ds
from lofar_quality.inspect.inspect_dataset import plot_inspect_ds
from pathlib import Path
import logging
FORMAT = '%(levelname)-15s %(asctime)s: %(message)s'
logging.basicConfig(format=FORMAT, level="INFO")
if __name__ == "__main__":
h5_paths = []
with open("inputs.txt", "r") as file:
for line in file:
line = str(line.strip()) # remove white space
path = Path(line)
if path.exists():
if path.suffix.lower() == ".h5":
h5_paths.append(line)
else:
logging.info(f"File exists but is not an h5 file: {line}")
else:
logging.info(f"Could not find the following input file: {line}")
logging.info(f"Found {len(h5_paths)} h5 files")
h5_output_path = "inspect.h5"
join_inspect_ds(h5_paths, h5_output_path)
plot_paths = plot_inspect_ds(h5_output_path, "./", min_elevation=15)
with open("outputs.txt", "w") as file:
file.write(str(Path(h5_output_path).absolute()) + "\n")
for file_path in plot_paths:
path = Path(file_path).absolute()
file.write(str(path) + "\n")