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Add option to use cwltool as runner (RAP-6)

Marcel Loose requested to merge RAP-491_CWLTool-as-runner into master

Created a new class, CWLRunner, with two child classes, CWLToolRunner and ToilRunner, and a factory method create_cwl_runner(), which returns an instance of either of the two child classes. The logic to configure a given runner has been moved from rapthor/lib/operation.py to the new file rapthor/lib/cwlrunner.py. A new parset key cwl_runner has been added. By default, toil will be used as CWL runner, but this can now easily be overridden by adding the option cwl_runner to the [cluster] section of the Rapthor parset file.

Closes RAP-6

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