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Commit ac25d9c1 authored by Mattia Mancini's avatar Mattia Mancini
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Change workflow to select only the first directory

Former-commit-id: 948be8b1
parent 058ccdd8
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id: copy_in_one_directory id: selectfirstdirectory
label: copy_in_one_directory label: selectfirstdirectory
class: ExpressionTool class: ExpressionTool
cwlVersion: v1.0 cwlVersion: v1.0
...@@ -9,7 +9,6 @@ inputs: ...@@ -9,7 +9,6 @@ inputs:
outputs: outputs:
- id: output - id: output
type: Directory type: Directory
glob: .
requirements: requirements:
- class: InitialWorkDirRequirement - class: InitialWorkDirRequirement
...@@ -19,7 +18,7 @@ requirements: ...@@ -19,7 +18,7 @@ requirements:
expression: | expression: |
${ ${
return {'output': inputs.input[0]}
} }
......
...@@ -161,17 +161,17 @@ outputs: ...@@ -161,17 +161,17 @@ outputs:
'sbg:x': 1554.5106201171875 'sbg:x': 1554.5106201171875
'sbg:y': 991 'sbg:y': 991
steps: steps:
- id: copy - id: select
in: in:
- id: input - id: input
source: source:
- msin - msin
out: out:
- id: output - id: output
run: ../../steps/copy_in_one_directory.cwl run: ../../steps/selectfirstdirectory.cwl
label: copy_in_one_directory label: select_ony_first
'sbg:x': -267.1643981933594 'sbg:x': -303.7861022949219
'sbg:y': 480.32098388671875 'sbg:y': 542.37646484375
- id: ndppp_prep_cal - id: ndppp_prep_cal
in: in:
- id: baselines_to_flag - id: baselines_to_flag
...@@ -263,7 +263,7 @@ steps: ...@@ -263,7 +263,7 @@ steps:
in: in:
- id: ms - id: ms
source: source:
- copy/output - select/output
- id: min_separation - id: min_separation
source: min_separation source: min_separation
out: out:
...@@ -290,7 +290,7 @@ steps: ...@@ -290,7 +290,7 @@ steps:
in: in:
- id: msin - id: msin
source: source:
- copy/output - select/output
- id: skymodels - id: skymodels
source: calibrator_path_skymodel source: calibrator_path_skymodel
- id: max_separation_arcmin - id: max_separation_arcmin
......
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