Add scripts path to ENV

Former-commit-id: 2787386c

Docker/Dockerfile

 FROM lofar/lofar-pipeline
 SHELL ["/bin/bash", "-c"]
 
-RUN mkdir /home/lofaruser/ && groupadd -r lofaruser && useradd --no-log-init -r -g lofaruser lofaruser
+RUN mkdir /home/lofaruser/ && \ 
+    groupadd -r lofaruser && \
+    useradd --no-log-init -r -g lofaruser lofaruser && \
+    chown lofaruser:lofaruser /home/lofaruser
 
-RUN apt-get update && apt-get install -y nodejs python3-pip
-RUN python3 -m pip install cwltool cwl-runner
+RUN apt-get update && apt-get install -y nodejs python3-pip git
+RUN python3 -m pip install cwltool cwl-runner git+https://github.com/darafferty/LSMTool
 
 ADD L570745_uv_first10.MS.tar.xz /data
 
 COPY scripts/* /usr/local/bin/
 RUN chmod +rx /usr/local/bin/*
-
+ENV PYTHONPATH="/usr/local/bin:${PYTHONPATH}"
 #ENTRYPOINT ["/home/lofaruser/.entrypoint"]
 USER lofaruser

Docker/build_docker.sh

-#!/bin/bash
+#! /bin/bash
 BRANCH=production
 REPO_URL=https://github.com/lofar-astron/prefactor
 
 # FETCHES THE SCRIPTS ONLY
 svn checkout ${REPO_URL}/branches/${BRANCH}/scripts
 SCRIPT_PATH=$(realpath ${BASH_SOURCE[0]})
-PATH=$(dirname ${SCRIPT_PATH})
+DOCKER_PATH=$(dirname ${SCRIPT_PATH})
 
-docker build $PATH -t prefactor:latest
+docker build ${DOCKER_PATH} -t prefactor:latest