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Commit 5477cfbb authored by Alexander Drabent's avatar Alexander Drabent
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added/checked inputs 

Former-commit-id: 1f6a00fb
parent 6ca04b22
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workflows/HBA_calibrator.cwl
+ 15
− 15
View file @ 5477cfbb
......@@ -189,10 +189,16 @@ inputs:
'sbg:x': -1000
'sbg:y': 1800
outputs:
- id: msout
- id: check_Ateam_separation.png
outputSource:
- prefactor/msout
type: 'Directory[]'
- prefactor/check_Ateam_separation.png
type: 'File[]?'
'sbg:x': 1000
'sbg:y': -300
- id: check_Ateam_separation.log
outputSource:
- prefactor/check_Ateam_separation.log
type: 'File[]?'
'sbg:x': 1000
'sbg:y': -200
- id: make_sourcedb_ateam.log
......@@ -201,30 +207,24 @@ outputs:
type: File?
'sbg:x': 1000
'sbg:y': -100
- id: logfile_prep_cal
- id: msout
outputSource:
- prefactor/logfile_prep_cal
type: 'File[]?'
- prefactor/msout
type: 'Directory[]'
'sbg:x': 1000
'sbg:y': 0
- id: check_Ateam_separation.png
- id: logfile_prep_cal
outputSource:
- prefactor/check_Ateam_separation.png
- prefactor/logfile_prep_cal
type: 'File[]?'
'sbg:x': 1000
'sbg:y': 100
- id: check_Ateam_separation.log
outputSource:
- prefactor/check_Ateam_separation.log
type: 'File[]?'
'sbg:x': 1000
'sbg:y': 200
- id: parset
outputSource:
- prefactor/parset
type: 'File[]'
'sbg:x': 1000
'sbg:y': 300
'sbg:y': 200
steps:
- id: prefactor
in:
......
workflows/prefactor_calibrator.cwl
+ 32
− 26
View file @ 5477cfbb
......@@ -189,36 +189,42 @@ inputs:
'sbg:x': -1000
'sbg:y': 1800
outputs:
- id: outh5parm
- id: check_Ateam_separation.png
outputSource:
- h5parm_collector/outh5parm
type: File
'sbg:x': 477
'sbg:y': -546.076171875
- id: log
- prep/check_Ateam_separation.png
type: 'File[]?'
'sbg:x': 1000
'sbg:y': -300
- id: check_Ateam_separation.log
outputSource:
- h5parm_collector/log
type: File
'sbg:x': 481.1239318847656
'sbg:y': -368.0228576660156
- id: output_imag
- prep/check_Ateam_separation.log
type: 'File[]?'
'sbg:x': 1000
'sbg:y': -200
- id: make_sourcedb_ateam.log
outputSource:
- check_ateam_separation/output_imag
- prep/make_sourcedb_ateam.log
type: File?
'sbg:x': 486.94464111328125
'sbg:y': -5.156437873840332
- id: logfile
'sbg:x': 1000
'sbg:y': -100
- id: msout
outputSource:
- check_ateam_separation/logfile
type: File?
'sbg:x': 492.1335754394531
'sbg:y': 133
- id: log_1
- prep/msout
type: 'Directory[]'
'sbg:x': 1000
'sbg:y': 0
- id: logfile_prep_cal
outputSource:
- make_sourcedb/log
type: File?
'sbg:x': 495.6245422363281
'sbg:y': -1257.4857177734375
- prep/logfile_prep_cal
type: 'File[]?'
'sbg:x': 1000
'sbg:y': 100
- id: parset
outputSource:
- prep/parset
type: 'File[]'
'sbg:x': 1000
'sbg:y': 200
steps:
- id: prep
in:
......@@ -270,8 +276,8 @@ steps:
label: prep
scatter:
- msin
'sbg:x': -359
'sbg:y': -519
'sbg:x': 0
'sbg:y': 0
requirements:
- class: SubworkflowFeatureRequirement
......
workflows/prefactor_calibrator/prep.cwl
+ 97
− 65
View file @ 5477cfbb
......@@ -9,118 +9,150 @@ inputs:
type: 'Directory[]'
'sbg:x': -1000
'sbg:y': -800
- id: flag_baselines
type: 'string[]'
- id: filter_baselines
type: string
'sbg:x': -1000
'sbg:y': -700
- id: process_baselines_cal
type: string
- id: raw_data
type: boolean
'sbg:x': -1000
'sbg:y': -600
- id: filter_baselines
type: string
- id: demix
type: boolean
'sbg:x': -1000
'sbg:y': -500
- id: do_smooth
type: boolean
- id: memoryperc
type: int
'sbg:x': -1000
'sbg:y': -400
- id: raw_data
type: boolean
- id: flag_baselines
type: 'string[]'
'sbg:x': -1000
'sbg:y': -300
- id: demix
- id: avg_timeresolution
type: float
'sbg:x': -1000
'sbg:y': -200
- id: avg_freqresolution
type: string
'sbg:x': -1000
'sbg:y': -100
- id: process_baselines_cal
type: string
'sbg:x': -1000
'sbg:y': 0
- id: demix_timestep
type: float
'sbg:x': -1000
'sbg:y': 100
- id: demix_freqstep
type: string
'sbg:x': -1000
'sbg:y': 100
- id: demix_target
type: string
'sbg:x': -1000
'sbg:y': 200
- id: demix_sources
type: string
'sbg:x': -1000
'sbg:y': 300
- id: do_smooth
type: boolean
'sbg:x': -639
'sbg:y': -206.68032836914062
- id: memoryperc
type: int
'sbg:x': -634
'sbg:y': -411
'sbg:x': -1000
'sbg:y': 400
- id: min_separation
type: float?
'sbg:x': -638.4987182617188
'sbg:y': 31.238996505737305
'sbg:x': -1000
'sbg:y': 500
- id: A-Team_skymodel
default: /data/skymodels/Ateam_LBA_CC.skymodel
type:
- string?
- File?
'sbg:x': -889
'sbg:y': -983.5078735351562
- id: timeresolution
type: float
'sbg:x': -634.4667358398438
'sbg:y': -817.0217895507812
- id: freqresolution
type: string
'sbg:x': -641.6406860351562
'sbg:y': -298.1281433105469
'sbg:x': -1000
'sbg:y': 600
outputs:
- id: check_Ateam_separation.png
outputSource:
- check_ateam_separation/output_imag
type: 'File[]?'
'sbg:x': 68.06497955322266
'sbg:y': -3.1985559463500977
'sbg:x': 1000
'sbg:y': -300
- id: check_Ateam_separation.log
outputSource:
- check_ateam_separation/logfile
type: 'File[]?'
'sbg:x': 83.07220458984375
'sbg:y': 136.60289001464844
'sbg:x': 1000
'sbg:y': -200
- id: make_sourcedb_ateam.log
outputSource:
- make_sourcedb/log
type: File?
'sbg:x': 71.66065216064453
'sbg:y': -880.4981689453125
'sbg:x': 1000
'sbg:y': -100
- id: msout
outputSource:
- ndppp_prep_cal/msout
type: 'Directory[]'
'sbg:x': 52.33274459838867
'sbg:y': -546.0951538085938
'sbg:x': 1000
'sbg:y': 0
- id: logfile_prep_cal
outputSource:
- ndppp_prep_cal/logfile
type: 'File[]?'
'sbg:x': 43.325523376464844
'sbg:y': -371.35504150390625
'sbg:x': 1000
'sbg:y': 100
- id: parset
outputSource:
- ndppp_prep_cal/parset
type: 'File[]'
'sbg:x': 49.54720687866211
'sbg:y': -680.8679809570312
'sbg:x': 1000
'sbg:y': 200
steps:
- id: ndppp_prep_cal
in:
- id: baselines_to_flag
default: []
- id: msin
linkMerge: merge_flattened
source:
- baselines_to_flag
- id: elevation_to_flag
default: 0deg..20deg
- id: min_amplitude_to_flag
default: 1.e-30
- id: memoryperc
default: 20
source: memoryperc
- msin
- id: filter_baselines
source: filter_baselines
default: "*"
- id: raw_data
default: false
source: raw_data
- id: demix
default: false
source: demix
- id: msin
linkMerge: merge_flattened
source:
- msin
- id: memoryperc
default: 20
source: memoryperc
- id: baselines_to_flag
default: []
source: flag_baselines
- id: avg_timeresolution
default: 1.
source: avg_timeresolution
- id: avg_freqresolution
default: "12.21kHz"
source: avg_freqresolution
- id: process_baselines_cal
default: "*"
source: process_baselines_cal
- id: demix_freqstep
default: 1
source: demix_freqstep
- id: demix_timestep
default: 1
source: demix_timestep
- id: demix_target
source: demix_target
- id: demix_sources
source: demix_sources
- id: skymodel
source: make_sourcedb/sourcedb
- id: timeresolution
source: timeresolution
- id: freqresolution
source: freqresolution
out:
- id: msout
- id: logfile
......@@ -129,8 +161,8 @@ steps:
label: ndppp_prep_cal
scatter:
- msin
'sbg:x': -359
'sbg:y': -519
'sbg:x': 0
'sbg:y': 0
- id: check_ateam_separation
in:
- id: ms
......@@ -143,8 +175,8 @@ steps:
- id: logfile
run: ../../lofar-cwl/steps/check_ateam_separation.cwl
label: check_Ateam_separation
'sbg:x': -331.452392578125
'sbg:y': 23.596216201782227
'sbg:x': 0
'sbg:y': -300
- id: make_sourcedb
in:
- id: sky_model
......@@ -154,8 +186,8 @@ steps:
- id: log
run: ../../lofar-cwl/steps/makesourcedb.cwl
label: make_sourcedb_ateam
'sbg:x': -647.0108642578125
'sbg:y': -981.3153076171875
'sbg:x': -500
'sbg:y': 300
requirements:
- class: SubworkflowFeatureRequirement
- class: ScatterFeatureRequirement
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