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Commit 34879c57 authored by Tammo Jan Dijkema's avatar Tammo Jan Dijkema
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Rename stuff in AverageStepGenerator and ParsetGenerator

parent 614ae076
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2 merge requests!69Change the name of the pre-calibrated output MS,!4Fix toil interop
Pipeline #199 failed
Stage: validate_cwl_scripts
Stage: test_steps
Stage: integration_test
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steps/DP3.AveragerStepGenerator.cwl
+ 2
− 2
View file @ 34879c57
...@@ -5,7 +5,7 @@ cwlVersion: v1.0 ...@@ -5,7 +5,7 @@ cwlVersion: v1.0
id: average_step_generator id: average_step_generator
inputs: inputs:
- id: input_parset - id: steps
type: Any[]? type: Any[]?
default: [] default: []
- id: step_name - id: step_name
...@@ -61,7 +61,7 @@ steps: ...@@ -61,7 +61,7 @@ steps:
- id: step_id - id: step_id
source: step_name source: step_name
- id: steps - id: steps
source: input_parset source: steps
- id: parameters - id: parameters
valueFrom: $(inputs) valueFrom: $(inputs)
- id: timestep - id: timestep
......
steps/DP3.ParsetGenerator.cwl
+ 3
− 3
View file @ 34879c57
...@@ -54,11 +54,11 @@ inputs: ...@@ -54,11 +54,11 @@ inputs:
type: Any[]? type: Any[]?
outputs: outputs:
- id: output_parset - id: parset
doc: Parset output file doc: Parset output file
type: File type: File
outputBinding: outputBinding:
glob: output_parset glob: parset
- id: input_files - id: input_files
doc: additional input files doc: additional input files
type: File[] type: File[]
...@@ -145,4 +145,4 @@ outputs: ...@@ -145,4 +145,4 @@ outputs:
return out_names return out_names
} }
stdout: stdout:
output_parset parset
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