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ResearchAndDevelopment
LINC
Commits
0f39bd79
Commit
0f39bd79
authored
5 years ago
by
Tammo Jan Dijkema
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Remove debugging file
parent
91498e10
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2 merge requests
!69
Change the name of the pre-calibrated output MS
,
!4
Fix toil interop
Pipeline
#209
canceled
5 years ago
Stage: validate_cwl_scripts
Stage: test_steps
Stage: integration_test
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prefactor_calibrator_no_flagging.cwl
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View file @
91498e10
class: Workflow
cwlVersion: v1.0
id: prefactor_calibrator
label: prefactor_calibrator
$namespaces:
sbg: 'https://www.sevenbridges.com/'
inputs:
- id: raw_data
type: boolean
'sbg:x': -620
'sbg:y': -683
- id: demix
type: boolean
'sbg:x': -617
'sbg:y': -347
- id: msin
type: 'Directory[]'
'sbg:x': -656
'sbg:y': -525
outputs:
- id: demix_parmdb
outputSource:
- ndppp_prep_cal/demix_parmdb
type:
- 'null'
- Directory
- type: array
items: Directory
'sbg:x': -67.85011291503906
'sbg:y': -356.76287841796875
- id: output_ms
outputSource:
- aoflagger/output_ms
type: 'Directory[]'
'sbg:x': 353.094482421875
'sbg:y': -641.6251831054688
steps:
- id: ndppp_prep_cal
in:
- id: baselines_to_flag
default: []
- id: elevation_to_flag
default: 0deg..20deg
- id: min_amplitude_to_flag
default: 1.e-30
- id: memoryperc
default: 20
- id: raw_data
source: raw_data
- id: demix
source: demix
- id: msin
linkMerge: merge_flattened
source:
- msin
out:
- id: msout
- id: demix_parmdb
run: subworkflow/ndppp_prep_cal.cwl
label: ndppp_prep_cal
scatter:
- msin
'sbg:x': -359
'sbg:y': -519
- id: aoflagger
in:
- id: msin
source:
- ndppp_prep_cal/msout
out:
- id: output_ms
run: steps/AOFlagger.cwl
label: AOFlagger
'sbg:x': 122.55892181396484
'sbg:y': -614.0164184570312
requirements:
- class: SubworkflowFeatureRequirement
- class: ScatterFeatureRequirement
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