Newer
Older
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
class: CommandLineTool
cwlVersion: v1.0
$namespaces:
sbg: 'https://www.sevenbridges.com/'
id: interpolate_visibilities
baseCommand:
- DPPP
arguments:
- msout.datacolumn=INTERP_DATA
- msout=.
- msin.datacolumn=DATA
- steps=[interpolate]
inputs:
- id: msin
type: Directory
inputBinding:
prefix: 'msin='
separate: false
- id: storage_manager
type: string
default: Dysco
inputBinding:
separate: false
prefix: 'msout.storagemanager='
- id: storage_manager_databitrate
type: int
default: 0
inputBinding:
prefix: 'msout.storagemanager.databitrate='
separate: false
- id: window_size
type: int
inputBinding:
prefix: 'interpolate.windowsize='
separate: false
outputs:
- id: msout
type: Directory
outputBinding:
glob: $(inputs.msin.basename)
label: interpolate_visibilities
hints:
- class: DockerRequirement
requirements:
- class: InitialWorkDirRequirement
listing:
- entry: $(inputs.msin)
writable: true