diff --git a/.gitattributes b/.gitattributes index aa5734fe4af9447fd22ce9c50321cca811f5e6a2..4541a261e895d559530e5e6e606d245e7f7e2658 100644 --- a/.gitattributes +++ b/.gitattributes @@ -143,6 +143,9 @@ CEP/DP3/AOFlagger/detectrfi.kdevelop -text CEP/DP3/AOFlagger/detectrfi.kdevelop.filelist -text CEP/DP3/AOFlagger/doc/site/AOFlagger-1.0.1.tar.bz2 -text CEP/DP3/AOFlagger/doc/site/AOFlagger-1.1.0.tar.bz2 -text +CEP/DP3/AOFlagger/doc/site/AOFlagger-1.2.0.tar.bz2 -text +CEP/DP3/AOFlagger/doc/site/AOFlagger-1.3.0.tar.bz2 -text +CEP/DP3/AOFlagger/doc/site/CHANGELOG -text CEP/DP3/AOFlagger/doc/site/faq.html -text CEP/DP3/AOFlagger/doc/site/gui-tutorial.html -text CEP/DP3/AOFlagger/doc/site/img/rfi-example-A0.png -text diff --git a/CEP/DP3/AOFlagger/doc/site/AOFlagger-1.2.0.tar.bz2 b/CEP/DP3/AOFlagger/doc/site/AOFlagger-1.2.0.tar.bz2 new file mode 100644 index 0000000000000000000000000000000000000000..1779d267c4d5f9b4ea5a231371fd890593bbc72c Binary files /dev/null and b/CEP/DP3/AOFlagger/doc/site/AOFlagger-1.2.0.tar.bz2 differ diff --git a/CEP/DP3/AOFlagger/doc/site/AOFlagger-1.3.0.tar.bz2 b/CEP/DP3/AOFlagger/doc/site/AOFlagger-1.3.0.tar.bz2 new file mode 100644 index 0000000000000000000000000000000000000000..4121a2306e166e4d7fb8d24992e24ecb79dbaf1a Binary files /dev/null and b/CEP/DP3/AOFlagger/doc/site/AOFlagger-1.3.0.tar.bz2 differ diff --git a/CEP/DP3/AOFlagger/doc/site/CHANGELOG b/CEP/DP3/AOFlagger/doc/site/CHANGELOG new file mode 100644 index 0000000000000000000000000000000000000000..acdaddbc26170882619f5fdfe1d4cfa9e1ed69be --- /dev/null +++ b/CEP/DP3/AOFlagger/doc/site/CHANGELOG @@ -0,0 +1,55 @@ +Version 1.3.0 +2011-04-26 André Offringa <of...nga@astro.rug.nl> + + * Several esthetic changes to the gui, including rounded values on the axes, a z-axis scale and fixed z-scale + * Feature to create a graphical map of the antennas in a set + * Various improvements to collection of statistics, such as time-frequency noise plots + * Dynamic noise spectra generated by the CollectNoiseAction can be opened and re-flagged in RFI gui. + * Added several unit tests to test correctness of the more complicated algorithms + * New action that acts like it resamples the data in a specific way, for testing it side effects. + * Fringe fitting can be performed on any source now + * Bugfix: Fix of 1d convolution out-of-bounds error, reported by R. van Nieuwpoort + * Bugfix: fitting of curve when no data is present + * Bugfix: Fix of somewhat confusing side effect of the dilation operation when the Equal polarisation setting was removed. Reported by A. Biggs. + * Bugfix: Fix for bug reported by P. Serra, flagging on Stokes Q in a 2 polarization (XX,YY) set did not work + * Many other small bugfixes + +Version 1.2.0 +2011-02-28 André Offringa <of...nga@astro.rug.nl> + + * Dependency on GSL removed + * Added RMS plot option + * Added option to rficonsole to specify data column used for flagging + * Added opening of solution tables + * Added some checks and error messages when making common strategy errors + * RFI console will now output the total percentages per polarization + * Added support for skipping mses that have already been flagged + * The edit strategy window works more intuitively now + * Goto window will select current baseline when opening + * RFI Console now writes an entry in the HISTORY table of the Measurement Set + * Logging has been formatted and start time was added. + * Added "Set and show image plane" button in plot menu + * Added feature to continue with already resorted MS in indirect baseline reader + * The AdapterAction has been replaced by the ForEachComplexComponentAction + * Strategy XML file is now formatted to make it human readable + * Allow indirect reading of an MS + * The indirect reading mode can be used in the GUI + * Allow reading of raw RCP files + * Changing the default threshold for baseline selection suggestor to 8 sigma + * Fixed several GUI issues that made the GUI crash when having multiple windows open + * Fixed error when opening reference tables, e.g. concattenated tables. + * Fixed two race conditions found by Helgrind + * Fixed bug in reported coordinates when zooming + * Fixed NaN issues while imaging certain sets + * Fixed bug that prevented column selection to actually have effect + * Allow lower memory machines + * Default strategy is about 20% faster and equally accurate + * Changed directory structure of source code + * Fixed various rare segmentation faults + * A lot of bug fixes and feature enhancements related to filtering + * A lot of doc fixes + * Fixed some bugs that caused NDPPP not to work + * Some Mac fixes by Ger van Diepen + +Version 1.1.0 +2010-10-22 André Offringa <of...nga@astro.rug.nl> diff --git a/CEP/DP3/AOFlagger/doc/site/index.html b/CEP/DP3/AOFlagger/doc/site/index.html index 475456867a867f9d7f6e7d5a4abd17f7a539e29c..783c33c0157aac69af480f02b167554cee0d91a8 100644 --- a/CEP/DP3/AOFlagger/doc/site/index.html +++ b/CEP/DP3/AOFlagger/doc/site/index.html @@ -5,7 +5,7 @@ <h3>RFI software</h3> <p>This page describes the software to detect and mitigate radio frequency interference (RFI) in a radio measurement set. It is described in the article "Post-correlation radio frequency interference classification methods" by Offringa et al, published in <a href="http://adsabs.harvard.edu/doi/10.1111/j.1365-2966.2010.16471.x">MNRAS, Volume 405, Issue 1, pp. 155-167</a>. Please acknowledge this paper in publications in which the software is used. </p> <p>I've made a "<a href="faq.html">Frequently Asked Questions</a>" page for the software and a short <a href="gui-tutorial.html">RFI GUI tutorial</a>.</p> -<p>Latest news: a new version was released - version 1.1.0, 22 October 2010.</p> +<p>Latest news: a new version was released - version 1.2.0, 28 Februari 2010.</p> <p>Contents:</p> <ul> <li>Introduction</li> @@ -22,8 +22,10 @@ <p>The software has been tested extensively on low radio frequencies (150 MHz or lower) produced by the <a href="http://www.astron.nl/radio-observatory/astronomers/wsrt-astronomers">WSRT</a> and <a href="http://www.lofar.org">LOFAR</a> telescopes. LOFAR is the Low Frequency Array that is built in and around the Netherlands. Higher frequencies should work as well. Some of the methods implemented are the <tt>SumThreshold</tt>, the <tt>VarThreshold</tt> and the singular value decomposition (SVD) method. Included also are several surface fitting algorithms.</p> <p>The software is published under the GNU General Public License version 3.</p> <h3>Download</h3> -<p>The latest version of the software is version 1.1.0, packaged on 16 June 2010, and can be downloaded here:</p> -<ul><li>Download: <a href="AOFlagger-1.1.0.tar.bz2">AOFlagger-1.1.0.tar.bz2</a> (16 June 2010)</li></ul> +<p>The latest version of the software is version 1.2.0 and can be downloaded here:</p> +<ul><li>Download: <a href="AOFlagger-1.3.0.tar.bz2">AOFlagger-1.3.0.tar.bz2</a> (26 April 2011, <a href="CHANGELOG">changelog</a>)</li></ul> +<ul><li>Download: <a href="AOFlagger-1.2.0.tar.bz2">AOFlagger-1.2.0.tar.bz2</a> (28 Februari 2011)</li></ul> +<ul><li>Download: <a href="AOFlagger-1.1.0.tar.bz2">AOFlagger-1.1.0.tar.bz2</a> (22 October 2010)</li></ul> <p>You can not compile it right away; see the compilation instruction below.</p> <h3>Installation</h3> <p>The package contains part of the LOFAR software tree. In contrast to the previous version, this version does no longer including external libraries: they need to be installed separately. Most astronomical workstations will have most of the libraries.</p> @@ -36,7 +38,7 @@ <li><a href="http://xmlsoft.org/">libxml</a>, used for saving scripts / configurations.</li> <li><a href="http://www.netlib.org/clapack/">CLAPACK</a>, for linear algebra, such as singular value decomposition.</li> <li><a href="http://heasarc.nasa.gov/fitsio/">CFITSIO</a>, for reading and writing FITS files.</li> -<li><a href="http://www.gnu.org/software/gsl/">GNU Science Library</a>, for some generic mathematical operations.</li> +<li><a href="http://www.gnu.org/software/gsl/">GNU Science Library</a>, for some generic mathematical operations (no longer required since version 1.2).</li> <li>gtkmm (only for <tt>rfigui</tt>)</li> </ul> <p>All the libraries are available as free and open software. The gtkmm libraries and headers are only required to compile the gui. If they are not present, cmake will warn about it, but will compile the console programs nevertheless.</p>