diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 5856d56ada71951cdc02835bc14bf1477305619d..bf25e90679e00f59ccb5279a9373195d68101677 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -195,7 +195,7 @@ deploy_nomad_central:
parallel:
matrix:
- COMPONENT:
- - aggregate
+ - extract
environment:
name: central
script:
diff --git a/README.md b/README.md
index d330c9acfa32dfabb24f5028b5d5a255b49e1a56..baba51050567ee980df6aae7dc558bae6200ea48 100644
--- a/README.md
+++ b/README.md
@@ -6,17 +6,55 @@
Station statistics gather and dump utility, writes station statistics contiously to the local S3 based object storage.
## Installation
+
```
pip install .
```
## Usage
+To forward (copy) statistics packets, metadata, or matrices from one place to another, use the following command:
+
+```bash
+l2ss-stingray-forward <source> <destination> --datatype=packet|json
+```
+
+These locations are supported for ``source`` and ``destionation``:
+
+* ``file:<path>``: read/write from a file on disk,
+* ``tcp://<host>:<port>``: receive from/write to a TCP server,
+* ``udp://<host>:<port>``: receive on/write to a UDP server,
+* ``s3://<host>/<bucket>/<path>``: write to an S3 store as JSON (destination only),
+* ``zmq+tcp://<host>:<port>/<topic>``: subscribe to ZMQ server and topic (source only),
+
+The ``packet`` datatype is used to process (binary) statistics packets from SDP, and the ``json`` datatype
+is used to process lines of JSON, the encoding used for metadata and matrices.
+
+To convert statistics packets into matrices and publish those using ZMQ, use the following command:
+
```bash
-l2ss-stingray-record <source> <target>
+l2ss-stingray-publish <station> <antennafield> <type> <source>
```
+
+To extract a set of matrices from disk, annotate them with metadata, and write them as HDF5 files, use:
+
```bash
-l2ss-stingray-aggregate <station> <antennafield> <type> <from> <to> <source> <target>
+l2ss-stingray-extract <station> <antennafield> <type> <from> <to> <source> <destination>
+```
+
+## Example
+
+The following commands, when started in parallel in the order listed, will convert the XST packets in ``tests/xst-packets.bin`` to JSON matrices in ``xst-matrices.txt``:
+
+```bash
+# start converter & publisher
+l2ss-stingray-publish cs123 hba xst udp://0:5000
+
+# catch output of publisher
+l2ss-stingray-forward -d json 'zmq+tcp://localhost:6001/xst?content_type=application/json' file:xst-matrices.txt
+
+# provide input to converter
+l2ss-stingray-forward file:tests/xst-packets.bin udp://127.0.0.1:5000
```
## Contributing
diff --git a/infra/jobs/central/aggregate.levant.nomad b/infra/jobs/central/extract.levant.nomad
similarity index 95%
rename from infra/jobs/central/aggregate.levant.nomad
rename to infra/jobs/central/extract.levant.nomad
index 67e4e36e983d741b5fd0d2b8d9a4dfa89e3bf28d..89d86405636e1d8ace048f6a629999be40b73fdd 100644
--- a/infra/jobs/central/aggregate.levant.nomad
+++ b/infra/jobs/central/extract.levant.nomad
@@ -1,4 +1,4 @@
-job "statistics-aggregate" {
+job "statistics-extract" {
datacenters = ["nl-north"]
type = "batch"
namespace = "statistics"
@@ -26,7 +26,7 @@ job "statistics-aggregate" {
image = "git.astron.nl:5000/lofar2.0/stingray/stingray:[[$.image_tag]]"
entrypoint = [
- "l2ss-stingray-aggregate",
+ "l2ss-stingray-extract",
"--endpoint", "s3.lofar.net",
"--secure",
"${NOMAD_META_station}",
diff --git a/infra/jobs/station/stingray.levant.nomad b/infra/jobs/station/stingray.levant.nomad
index c67cb42b8305d7aad09049b3a392b34637b1e921..1d1162cea4e4ee60b8b4ec0026c92e4c92b0fc1d 100644
--- a/infra/jobs/station/stingray.levant.nomad
+++ b/infra/jobs/station/stingray.levant.nomad
@@ -15,14 +15,15 @@ job "statistics" {
mode = "bridge"
}
- task "stingray-metadata" {
+ task "stingray-record-metadata" {
driver = "docker"
config {
image = "git.astron.nl:5000/lofar2.0/stingray/stingray:[[$.image_tag]]"
entrypoint = [
- "l2ss-stingray-record",
+ "l2ss-stingray-forward",
+ "--datatype=json",
"zmq+tcp://device-metadata.service.consul:6001/metadata?content-type=application%2Fjson",
"s3://statistics/[[$.station]]/metadata"
]
@@ -30,7 +31,7 @@ job "statistics" {
env {
MINIO_ROOT_USER = "[[$.object_storage.user.name]]"
- MINIO_ROOT_PASSWORD = "[[$.object_storage.user.name]]"
+ MINIO_ROOT_PASSWORD = "[[$.object_storage.user.pass]]"
}
@@ -42,39 +43,95 @@ job "statistics" {
}
[[ range $af, $fields := $.stingray ]]
- group "stingray-[[ $af ]]" {
+ [[ range $st, $port := $fields ]]
+ group "stingray-[[ $af ]]-[[ $st ]]" {
count = 1
network {
- mode = "bridge"
+ mode = "cni/station"
}
- [[ range $st, $port := $fields ]]
- task "stingray-[[ $af ]]-[[ $st ]]" {
- driver = "docker"
+ service {
+ name = "stingray-[[ $af ]]-[[ $st ]]-zmq"
+ port = 6001
+ address_mode = "alloc"
+
+ check {
+ type = "tcp"
+ interval = "20s"
+ timeout = "5s"
+ address_mode = "alloc"
+ }
+ }
- config {
- image = "git.astron.nl:5000/lofar2.0/stingray/stingray:[[$.image_tag]]"
+ service {
+ name = "stingray-[[ $af ]]-[[ $st ]]-udp"
+ port = [[ $port ]]
+ address_mode = "alloc"
+ }
- entrypoint = [
- "l2ss-stingray-record",
- "tcp://device-[[ $st ]].service.consul:[[ $port ]]",
- "s3://statistics/[[$.station]]/[[ $st ]]/[[ $af ]]"
- ]
- }
+ service {
+ name = "stingray-[[ $af ]]-[[ $st ]]-publish-metrics"
+ tags = ["scrape"]
+ port = 8000
+ address_mode = "alloc"
+ }
- env {
- MINIO_ROOT_USER = "[[$.object_storage.user.name]]"
- MINIO_ROOT_PASSWORD = "[[$.object_storage.user.name]]"
- }
+ service {
+ name = "stingray-[[ $af ]]-[[ $st ]]-record-metrics"
+ tags = ["scrape"]
+ port = 8001
+ address_mode = "alloc"
+ }
+ task "stingray-publish-[[ $af ]]-[[ $st ]]" {
+ driver = "docker"
+
+ config {
+ image = "git.astron.nl:5000/lofar2.0/stingray/stingray:[[ $.image_tag ]]"
+
+ entrypoint = [
+ "l2ss-stingray-publish",
+ "[[ $.station ]]",
+ "[[ $af ]]",
+ "[[ $st ]]",
+ "udp://0.0.0.0:[[ $port ]]",
+ "--port=6001"
+ ]
+ }
+
+ resources {
+ cpu = 10
+ memory = 512
+ }
+ }
- resources {
- cpu = 10
- memory = 512
- }
- }
- [[ end ]]
+ task "stingray-record-[[ $af ]]-[[ $st ]]" {
+ driver = "docker"
+
+ config {
+ image = "git.astron.nl:5000/lofar2.0/stingray/stingray:[[$.image_tag]]"
+
+ entrypoint = [
+ "l2ss-stingray-forward",
+ "--datatype=json",
+ "zmq+tcp://localhost:6001/[[ $st ]]/[[ $af ]]/",
+ "s3://statistics/[[$.station]]/[[ $st ]]/[[ $af ]]",
+ "--metrics-port=8001"
+ ]
+ }
+
+ env {
+ MINIO_ROOT_USER = "[[$.object_storage.user.name]]"
+ MINIO_ROOT_PASSWORD = "[[$.object_storage.user.pass]]"
+ }
+
+ resources {
+ cpu = 10
+ memory = 512
+ }
+ }
}
[[ end ]]
+ [[ end ]]
}
diff --git a/lofar_stingray/_prometheus.py b/lofar_stingray/_prometheus.py
new file mode 100644
index 0000000000000000000000000000000000000000..dfde5d64c28401c88719fb25d575f8eea7374f24
--- /dev/null
+++ b/lofar_stingray/_prometheus.py
@@ -0,0 +1,16 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Reusable Prometheus helpers"""
+
+from argparse import ArgumentParser
+
+
+def add_prometheus_argument(parser: ArgumentParser):
+ """Add prometheus endpoint argument"""
+ parser.add_argument(
+ "--metrics-port",
+ type=int,
+ default=8000,
+ help="the HTTP port number for exposing Prometheus metrics",
+ )
diff --git a/lofar_stingray/aggregator/__init__.py b/lofar_stingray/aggregator/__init__.py
index 9cbea117328ff7e1277bd9ccf0b3726d7f0b7888..6b7256d68c580e5a9120491a06b51c3b3bbd40bd 100644
--- a/lofar_stingray/aggregator/__init__.py
+++ b/lofar_stingray/aggregator/__init__.py
@@ -6,5 +6,11 @@
from ._bst_aggregator import BstAggregator
from ._sst_aggregator import SstAggregator
from ._xst_aggregator import XstAggregator
+from ._collect import CollectPacketsPerTimestamp
-__all__ = ["BstAggregator", "SstAggregator", "XstAggregator"]
+__all__ = [
+ "BstAggregator",
+ "SstAggregator",
+ "XstAggregator",
+ "CollectPacketsPerTimestamp",
+]
diff --git a/lofar_stingray/aggregator/_base.py b/lofar_stingray/aggregator/_base.py
index fa6f351b214e043e448457dd8613a69c1f8c8d28..ad26d8a7ba9faf6d2f5e01b5bafb4129c047247b 100644
--- a/lofar_stingray/aggregator/_base.py
+++ b/lofar_stingray/aggregator/_base.py
@@ -1,99 +1,44 @@
# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
# SPDX-License-Identifier: Apache-2.0
-""" Base aggregator class """
+""" Base annotator class """
from abc import ABC, abstractmethod
-from datetime import datetime, timedelta
-from typing import Iterable
-from lofar_station_client.common import CaseInsensitiveDict
-from lofar_station_client.statistics.statistics_data import StatisticsDataFile
+import numpy
-from lofar_stingray import __version__
+from .message import Message
class BaseAggregator(ABC):
- """Base aggregator class"""
+ """Base annotator class"""
- def __init__(self, station: str, antennafield: str, metadata_packets: Iterable):
- self._metadata_packets = metadata_packets
- self.station = station
- self.antennafield = antennafield
- self.metadata = CaseInsensitiveDict()
-
- def _load_metadata(self):
- """Load and prepare the metadata"""
- for packet in self._metadata_packets:
- for device, data in packet.items():
- if self.antennafield not in device.casefold():
- continue
-
- device_name = device.split("/")[1]
- device_name = (
- "antennafield" if device_name.startswith("af") else device_name
- )
-
- if device_name not in self.metadata:
- data["name"] = device
- self.metadata[device_name] = CaseInsensitiveDict(data)
-
- @staticmethod
- def format_timestamp(timestamp: datetime) -> str:
- """Round the given timestamp to the nearst millisecond."""
- return timestamp.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3]
-
- @staticmethod
- def round_datetime_ms(timestamp: datetime) -> datetime:
- """Round the given timestamp to the nearst millisecond."""
- subtract_us = timestamp.microsecond - round(timestamp.microsecond, -3)
- return timestamp - timedelta(microseconds=subtract_us)
+ def __init__(self):
+ pass
@abstractmethod
- def convert(self, statistics: StatisticsDataFile):
- """Convert the statistics packets and store into the StatisticsDataFile"""
+ def new_matrix(self):
+ """Return an empty matrix into which all packets
+ with the same timestamp can be aggregated"""
- @property
@abstractmethod
- def mode(self):
- """Return the current packet mode"""
+ def add_packet_to_matrix(self, packet, matrix: numpy.ndarray) -> numpy.ndarray:
+ """Add a packet to the matrix. Returns the updated matrix."""
+
+ def packets_to_matrix(self, packets: list):
+ """Combine multiple packets into a single matrix."""
- def set_file_header(self, statistics: StatisticsDataFile):
- """Returns the header fields per HDF5 file."""
+ matrix = self.new_matrix()
+ for packet in packets:
+ if packet["source_info"]["payload_error"]:
+ continue
- self._load_metadata()
- statistics.station_name = self.station
- # statistics.station_version = _get_station_version(self.antennafield_device)
- statistics.writer_version = __version__
- statistics.mode = self.mode
+ matrix = self.add_packet_to_matrix(packet, matrix)
- statistics.antennafield_device = self.metadata.get("antennafield", {}).get(
- "name", str()
- )
- statistics.antenna_names = self.metadata.get("antennafield", {}).get(
- "Antenna_Names_R", []
- )
- statistics.antenna_type = self.antennafield[:3].upper()
- statistics.rcu_pcb_id = self.metadata.get("antennafield", {}).get(
- "RCU_PCB_ID_R", []
- )
- statistics.rcu_pcb_version = self.metadata.get("antennafield", {}).get(
- "RCU_PCB_version_R", []
- )
- statistics.antenna_status = self.metadata.get("antennafield", {}).get(
- "Antenna_Status_R", []
- ) # noqa
- statistics.antenna_usage_mask = self.metadata.get("antennafield", {}).get(
- "Antenna_Usage_Mask_R", []
- ) # noqa
- statistics.antenna_reference_itrf = self.metadata.get("antennafield", {}).get(
- "Antenna_Reference_ITRF_R", []
- ) # noqa
+ return matrix
- statistics.fpga_firmware_version = self.metadata.get("sdpfirmware", {}).get(
- "FPGA_firmware_version_R", []
- )
- statistics.fpga_hardware_version = self.metadata.get("sdpfirmware", {}).get(
- "FPGA_hardware_version_R", []
- )
+ @staticmethod
+ @abstractmethod
+ def matrix_to_messages(matrix) -> list[Message]:
+ """Convert a matrix into one or more dicts."""
diff --git a/lofar_stingray/aggregator/_bst_aggregator.py b/lofar_stingray/aggregator/_bst_aggregator.py
index 646c1908cba9e2e040a00b016eda7a639501392c..fbcfc407e5d09a186885279f2092de103355944e 100644
--- a/lofar_stingray/aggregator/_bst_aggregator.py
+++ b/lofar_stingray/aggregator/_bst_aggregator.py
@@ -3,16 +3,10 @@
""" Class to aggregate BST statistics """
-from datetime import datetime
-from typing import Iterable
-
import numpy as np
from lofar_station_client.dts.constants import N_pol
-from lofar_station_client.statistics.statistics_data import (
- StatisticsDataFile,
-)
-
from ._base import BaseAggregator
+from .message import BSTMessage
class BstAggregator(BaseAggregator):
@@ -21,53 +15,31 @@ class BstAggregator(BaseAggregator):
# beamlets = 488 * 2 for the x and y polarisations
MAX_BEAMLETS = 488
- def __init__(
- self,
- station: str,
- antennafield: str,
- metadata_packets: Iterable,
- packets: Iterable,
- ):
- super().__init__(station, antennafield, metadata_packets)
- self.package_loader = packets
-
- @property
- def mode(self):
- return "BST"
-
- @staticmethod
- def _reformat_timestamp(timestamp: str) -> str:
- timestamp = datetime.fromisoformat(timestamp)
- timestamp = BaseAggregator.round_datetime_ms(timestamp)
- return BaseAggregator.format_timestamp(timestamp)
-
- def convert(self, statistics: StatisticsDataFile):
- self.set_file_header(statistics)
- for packet in self.package_loader:
-
- if packet["source_info"]["payload_error"]:
- continue
-
- beamlets = np.array(packet["payload"])
- nr_beamlets = beamlets.shape[0]
- first_beamlet = packet["data_id"]["beamlet_index"]
- last_beamlet = first_beamlet + nr_beamlets
+ def new_matrix(self):
+ return np.zeros(
+ (self.MAX_BEAMLETS, N_pol),
+ dtype=np.float32,
+ )
+
+ def add_packet_to_matrix(self, packet, matrix):
+ beamlets = packet["payload"]
+ nr_beamlets = beamlets.shape[0]
+ first_beamlet = packet["data_id"]["beamlet_index"]
+ last_beamlet = first_beamlet + nr_beamlets
+
+ # determine which input this packet contains data for
+ if last_beamlet > self.MAX_BEAMLETS:
+ # packet describes an input that is out of bounds for us
+ raise ValueError(
+ f"Packet describes {nr_beamlets} beamlets starting at "
+ f"{first_beamlet}, but we are limited "
+ f"to describing MAX_BEAMLETS={self.MAX_BEAMLETS}"
+ )
- # determine which input this packet contains data for
- if last_beamlet > self.MAX_BEAMLETS:
- # packet describes an input that is out of bounds for us
- raise ValueError(
- f"Packet describes {nr_beamlets} beamlets starting at "
- f"{first_beamlet}, but we are limited "
- f"to describing MAX_BEAMLETS={self.MAX_BEAMLETS}"
- )
+ matrix[first_beamlet:last_beamlet] = beamlets
- timestamp = self._reformat_timestamp(packet["timestamp"])
- matrix_name = f"BST_{timestamp}"
+ return matrix
- matrix = np.zeros(
- (self.MAX_BEAMLETS, N_pol),
- dtype=np.uint64,
- )
- matrix[first_beamlet:last_beamlet] = beamlets
- statistics[matrix_name] = matrix.astype(np.float32)
+ @staticmethod
+ def matrix_to_messages(matrix) -> list[BSTMessage]:
+ return [BSTMessage(bst_data=matrix)]
diff --git a/lofar_stingray/aggregator/_collect.py b/lofar_stingray/aggregator/_collect.py
new file mode 100644
index 0000000000000000000000000000000000000000..f943032e68588a688139b24ed9797a75152c209b
--- /dev/null
+++ b/lofar_stingray/aggregator/_collect.py
@@ -0,0 +1,42 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+
+"""Collect statistics packets per timestamp."""
+
+from typing import Generator
+
+from lofar_station_client.statistics.packets import StatisticsPacket
+
+
+class CollectPacketsPerTimestamp:
+ """Collect and return packets per timestamp. Assumes packets arrive in order."""
+
+ def __init__(self):
+ self.packets: list[StatisticsPacket] = []
+ self.current_timestamp = None
+
+ def put_packet(
+ self, packet: StatisticsPacket
+ ) -> Generator[list[StatisticsPacket], None, None]:
+ """Add another packet. Yield the full set of packets having the same
+ timestamp."""
+
+ if packet.timestamp != self.current_timestamp:
+ # packet is for next matrix, so current one is complete
+ if self.packets:
+ yield self.packets
+ self.packets = []
+
+ # collect next matrix
+ self.current_timestamp = packet.timestamp
+
+ # add to current matrix
+ self.packets.append(packet)
+
+ def done(self):
+ """Process any remaining data."""
+
+ if self.packets:
+ yield self.packets
+ self.packets = []
diff --git a/lofar_stingray/aggregator/_sst_aggregator.py b/lofar_stingray/aggregator/_sst_aggregator.py
index 5b270d1581dde93ad9890bf195f8cbd46517bf4a..7b786ff546f91a5e142f5f9e0c2515ff3b128d38 100644
--- a/lofar_stingray/aggregator/_sst_aggregator.py
+++ b/lofar_stingray/aggregator/_sst_aggregator.py
@@ -3,15 +3,9 @@
""" Class to aggregate SST statistics """
-from datetime import datetime
-from typing import Optional, Iterable
-
import numpy as np
-from lofar_station_client.statistics.statistics_data import (
- StatisticsDataFile,
-)
-
from ._base import BaseAggregator
+from .message import SSTMessage
class SstAggregator(BaseAggregator):
@@ -25,66 +19,34 @@ class SstAggregator(BaseAggregator):
def __init__(
self,
- station: str,
- antennafield: str,
- metadata_packets: Iterable,
- packets: Iterable,
nr_signal_inputs: int = MAX_INPUTS,
first_signal_input_index: int = 0,
): # pylint: disable=too-many-arguments,too-many-positional-arguments
- super().__init__(station, antennafield, metadata_packets)
- self.package_loader = packets
self.nr_signal_inputs = nr_signal_inputs
self.first_signal_input_index = first_signal_input_index
- @property
- def mode(self):
- return "SST"
-
- def convert(self, statistics: StatisticsDataFile):
- self.set_file_header(statistics)
-
- current_timestamp: Optional[datetime] = None
- matrix = np.zeros(
- (self.nr_signal_inputs, self.MAX_SUBBANDS), dtype=np.uint64
- ).astype(np.float32)
-
- for packet in self.package_loader:
-
- if packet["source_info"]["payload_error"]:
- continue
-
- # amount of antennas
- input_index = (
- packet["data_id"]["signal_input_index"] - self.first_signal_input_index
+ def new_matrix(self):
+ return np.zeros((self.nr_signal_inputs, self.MAX_SUBBANDS), dtype=np.float32)
+
+ def add_packet_to_matrix(self, packet, matrix):
+ # amount of antennas
+ input_index = (
+ packet["data_id"]["signal_input_index"] - self.first_signal_input_index
+ )
+
+ # determine which input this packet contains data for
+ if not 0 <= input_index < self.nr_signal_inputs:
+ # packet describes an input that is out of bounds for us
+ raise ValueError(
+ f"Packet describes input {packet['data_id']['signal_input_index']}"
+ f", but we are limited to describing {self.nr_signal_inputs}"
+ f" starting at index {self.first_signal_input_index}"
)
- # determine which input this packet contains data for
- if not 0 <= input_index < self.nr_signal_inputs:
- # packet describes an input that is out of bounds for us
- raise ValueError(
- f"Packet describes input {packet['data_id']['signal_input_index']}"
- f", but we are limited to describing {self.nr_signal_inputs}"
- f" starting at index {self.first_signal_input_index}"
- )
-
- timestamp = datetime.fromisoformat(packet["timestamp"])
- timestamp = self.round_datetime_ms(timestamp)
-
- if current_timestamp is None:
- current_timestamp = timestamp
-
- if timestamp > current_timestamp:
- statistics[f"SST_{self.format_timestamp(current_timestamp)}"] = matrix
- matrix = np.zeros(
- (self.nr_signal_inputs, self.MAX_SUBBANDS), dtype=np.uint64
- ).astype(np.float32)
- current_timestamp = timestamp
+ matrix[input_index][: packet["nof_statistics_per_packet"]] = packet["payload"]
- # track timestamp
- matrix[input_index][: packet["nof_statistics_per_packet"]] = packet[
- "payload"
- ]
+ return matrix
- if current_timestamp is not None:
- statistics[f"SST_{self.format_timestamp(current_timestamp)}"] = matrix
+ @staticmethod
+ def matrix_to_messages(matrix) -> list[SSTMessage]:
+ return [SSTMessage(sst_data=matrix)]
diff --git a/lofar_stingray/aggregator/_xst_aggregator.py b/lofar_stingray/aggregator/_xst_aggregator.py
index 6a0a771db4150b6437ac78316db813aac541e9cd..dd629cb69aa4d40d8d15845da2d82a33dfbb4357 100644
--- a/lofar_stingray/aggregator/_xst_aggregator.py
+++ b/lofar_stingray/aggregator/_xst_aggregator.py
@@ -3,24 +3,15 @@
""" Class to aggregate XST statistics """
-from datetime import datetime
-from typing import Optional, Iterable
-
import numpy
from lofar_station_client.math.baseline import nr_baselines
-from lofar_station_client.statistics.statistics_data import (
- StatisticsDataFile,
-)
-
from ._base import BaseAggregator
+from .message import XSTMessage
class XstAggregator(BaseAggregator):
"""Class to aggregate XST statistics packets."""
- # Maximum number of subbands for which we collect XSTs simultaneously
- MAX_PARALLEL_SUBBANDS = 8
-
# Maximum number of antenna inputs we support (used to determine array sizes)
MAX_INPUTS = 192
@@ -43,22 +34,13 @@ class XstAggregator(BaseAggregator):
def __init__(
self,
- station: str,
- antennafield: str,
- metadata_packets: Iterable,
- packets: Iterable,
nr_signal_inputs=MAX_INPUTS,
first_signal_input_index=0,
): # pylint: disable=too-many-arguments,too-many-positional-arguments
- super().__init__(station, antennafield, metadata_packets)
- self.packets = packets
self.nr_signal_inputs = nr_signal_inputs
self.first_signal_input_index = first_signal_input_index
- self.nr_parallel_subbands = self.MAX_PARALLEL_SUBBANDS
- @property
- def mode(self):
- return "XST"
+ super().__init__()
@property
def nr_blocks(self):
@@ -95,7 +77,6 @@ class XstAggregator(BaseAggregator):
)
def _transpose_block(self, first_baseline, block):
-
# Make sure we always have a baseline (a,b) with a>=b. If not, we swap the
# indices and mark that the data must be conjugated and transposed when
# processed.
@@ -122,12 +103,11 @@ class XstAggregator(BaseAggregator):
block = block.conjugate().transpose()
return first_baseline, block
- def _new_matrix(self):
+ def new_matrix(self):
return numpy.array(
[],
dtype=[
("subband", numpy.int32),
- ("frequency", numpy.float32),
(
"data",
numpy.complex64,
@@ -136,77 +116,60 @@ class XstAggregator(BaseAggregator):
],
)
- def convert(self, statistics: StatisticsDataFile):
- self.set_file_header(statistics)
- matrix = self._new_matrix()
- current_timestamp: Optional[datetime] = None
- for packet in self.packets:
- if packet["source_info"]["payload_error"]:
- continue
-
- nof_signal_inputs = packet["nof_signal_inputs"]
- first_baseline = packet["data_id"]["first_baseline"]
+ def add_packet_to_matrix(self, packet, matrix):
+ nof_signal_inputs = packet["nof_signal_inputs"]
+ first_baseline = packet["data_id"]["first_baseline"]
- if nof_signal_inputs != self.BLOCK_LENGTH:
- raise ValueError(
- f"Packet describes a block of {nof_signal_inputs} x "
- f"{nof_signal_inputs} baselines, but we can only parse "
- f"blocks of {self.BLOCK_LENGTH} x {self.BLOCK_LENGTH} baselines"
- )
+ if nof_signal_inputs != self.BLOCK_LENGTH:
+ raise ValueError(
+ f"Packet describes a block of {nof_signal_inputs} x "
+ f"{nof_signal_inputs} baselines, but we can only parse "
+ f"blocks of {self.BLOCK_LENGTH} x {self.BLOCK_LENGTH} baselines"
+ )
- self._validate_baselines(first_baseline, nof_signal_inputs)
+ self._validate_baselines(first_baseline, nof_signal_inputs)
- subband = packet["data_id"]["subband_index"]
+ subband = packet["data_id"]["subband_index"]
- block = numpy.zeros(
- (self.BLOCK_LENGTH * self.BLOCK_LENGTH * self.VALUES_PER_COMPLEX)
+ block = numpy.zeros(
+ (self.BLOCK_LENGTH * self.BLOCK_LENGTH * self.VALUES_PER_COMPLEX)
+ )
+ block[: packet["nof_statistics_per_packet"]] = packet["payload"]
+
+ first_baseline, block = self._transpose_block(first_baseline, block)
+
+ if subband not in matrix["subband"]:
+ matrix = numpy.append(
+ matrix,
+ numpy.array(
+ [
+ (
+ subband,
+ numpy.zeros(
+ (self.nr_signal_inputs, self.nr_signal_inputs),
+ dtype=numpy.complex64,
+ ),
+ )
+ ],
+ dtype=matrix.dtype,
+ ),
)
- block[: packet["nof_statistics_per_packet"]] = packet["payload"]
-
- first_baseline, block = self._transpose_block(first_baseline, block)
- timestamp = self.round_datetime_ms(
- datetime.fromisoformat(packet["timestamp"])
+ (idx,) = numpy.nonzero(matrix["subband"] == subband)
+ matrix[idx[0]]["data"][
+ first_baseline[0] : first_baseline[0] + self.BLOCK_LENGTH,
+ first_baseline[1] : first_baseline[1] + self.BLOCK_LENGTH,
+ ] = block
+
+ return matrix
+
+ @staticmethod
+ def matrix_to_messages(matrix) -> list[XSTMessage]:
+ return [
+ XSTMessage(
+ subband=subband,
+ xst_data_real=numpy.real(data),
+ xst_data_imag=numpy.imag(data),
)
-
- if current_timestamp is None:
- current_timestamp = timestamp
-
- if timestamp > current_timestamp:
- # write new matrix
- statistics[f"XST_{self.format_timestamp(current_timestamp)}"] = matrix
- matrix = self._new_matrix()
- current_timestamp = timestamp
-
- if subband not in matrix["subband"]:
- try:
- freq = self.metadata["sdp"]["subband_frequency_r"][0][subband]
- except (KeyError, IndexError):
- freq = 0.0
-
- matrix = numpy.append(
- matrix,
- numpy.array(
- [
- (
- subband,
- freq,
- numpy.zeros(
- (self.nr_signal_inputs, self.nr_signal_inputs),
- dtype=numpy.complex64,
- ),
- )
- ],
- dtype=matrix.dtype,
- ),
- )
-
- (idx,) = numpy.nonzero(matrix["subband"] == subband)
- matrix[idx[0]]["data"][
- first_baseline[0] : first_baseline[0] + self.BLOCK_LENGTH,
- first_baseline[1] : first_baseline[1] + self.BLOCK_LENGTH,
- ] = block
-
- # flush latest
- if current_timestamp is not None:
- statistics[f"XST_{self.format_timestamp(current_timestamp)}"] = matrix
+ for subband, data in matrix
+ ]
diff --git a/lofar_stingray/aggregator/message.py b/lofar_stingray/aggregator/message.py
new file mode 100644
index 0000000000000000000000000000000000000000..d7199b565157ef8c70bd62478dc5348adb16e58d
--- /dev/null
+++ b/lofar_stingray/aggregator/message.py
@@ -0,0 +1,67 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Classes to encode ZMQ message payloads."""
+
+from dataclasses import dataclass, asdict, field
+from datetime import datetime
+import json
+
+import numpy
+
+from lofar_stingray.utils import StingrayJsonEncoder
+
+
+@dataclass
+class Message:
+ """Structure to hold the fields for a message to be exchanged over ZMQ."""
+
+ def zmq_payload(self) -> str:
+ """Turn this object into a ZMQ message payload."""
+ return json.dumps(asdict(self), cls=StingrayJsonEncoder)
+
+
+@dataclass
+# pylint: disable=too-many-instance-attributes
+class StatisticsHeader:
+ """Generic fields for metadata regarding statistics."""
+
+ timestamp: datetime = datetime.min
+
+ # source of statistics
+ station: str = ""
+ antenna_field: str = ""
+ type: str = ""
+
+ # packet header metadata,
+ # for testing and validation
+ packet_version: int = 0
+ station_id: int = 0
+ station_info: dict = field(default_factory=dict)
+ source_info: dict = field(default_factory=dict)
+ observation_id: int = 0
+ clock_mhz: int = 0
+ integration_interval: float = 0.0
+
+
+@dataclass
+class BSTMessage(Message, StatisticsHeader):
+ """A message describing and containing BSTs."""
+
+ bst_data: numpy.ndarray = field(default_factory=numpy.array)
+
+
+@dataclass
+class SSTMessage(Message, StatisticsHeader):
+ """A message describing and containing SSTs."""
+
+ sst_data: numpy.ndarray = field(default_factory=numpy.array)
+
+
+@dataclass
+class XSTMessage(Message, StatisticsHeader):
+ """A message describing and containing XSTs."""
+
+ subband: int = -1
+ xst_data_real: numpy.ndarray = field(default_factory=numpy.array)
+ xst_data_imag: numpy.ndarray = field(default_factory=numpy.array)
diff --git a/lofar_stingray/annotator/__init__.py b/lofar_stingray/annotator/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..e5dc767fe231a54a074d55b729bd10137e2895f5
--- /dev/null
+++ b/lofar_stingray/annotator/__init__.py
@@ -0,0 +1,10 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Provide classes to aggregate statistics data"""
+
+from ._bst_annotator import BstAnnotator
+from ._sst_annotator import SstAnnotator
+from ._xst_annotator import XstAnnotator
+
+__all__ = ["BstAnnotator", "SstAnnotator", "XstAnnotator"]
diff --git a/lofar_stingray/annotator/_base.py b/lofar_stingray/annotator/_base.py
new file mode 100644
index 0000000000000000000000000000000000000000..12729b2cd309a5c123ae418932310895b0380f0f
--- /dev/null
+++ b/lofar_stingray/annotator/_base.py
@@ -0,0 +1,103 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Base annotator class """
+
+
+from abc import ABC, abstractmethod
+from datetime import datetime, timedelta
+from typing import Iterable
+
+from lofar_station_client.common import CaseInsensitiveDict
+from lofar_station_client.statistics.statistics_data import StatisticsDataFile
+
+from lofar_stingray import __version__
+
+
+class BaseAnnotator(ABC):
+ """Base annotator class"""
+
+ def __init__(self, station: str, antennafield: str, metadata_packets: Iterable):
+ self._metadata_packets = metadata_packets
+ self.station = station
+ self.antennafield = antennafield
+ self.metadata = CaseInsensitiveDict()
+
+ def _load_metadata(self):
+ """Load and prepare the metadata"""
+ for packet in self._metadata_packets:
+ for device, data in packet.items():
+ if self.antennafield not in device.casefold():
+ continue
+
+ device_name = device.split("/")[1]
+ device_name = (
+ "antennafield" if device_name.startswith("af") else device_name
+ )
+
+ if device_name not in self.metadata:
+ data["name"] = device
+ self.metadata[device_name] = CaseInsensitiveDict(data)
+
+ @staticmethod
+ def format_timestamp(timestamp: datetime) -> str:
+ """Round the given timestamp to the nearst millisecond."""
+ return timestamp.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3]
+
+ @staticmethod
+ def round_datetime_ms(timestamp: datetime) -> datetime:
+ """Round the given timestamp to the nearst millisecond."""
+ subtract_us = timestamp.microsecond - round(timestamp.microsecond, -3)
+ return timestamp - timedelta(microseconds=subtract_us)
+
+ @abstractmethod
+ def write(self, statistics: StatisticsDataFile):
+ """Store the matrices and metadata into the StatisticsDataFile"""
+
+ @property
+ @abstractmethod
+ def mode(self):
+ """Return the current packet mode"""
+
+ def set_file_header(self, statistics: StatisticsDataFile):
+ """Returns the header fields per HDF5 file."""
+
+ self._load_metadata()
+ statistics.station_name = self.station
+ # statistics.station_version = _get_station_version(self.antennafield_device)
+ statistics.writer_version = __version__
+ statistics.mode = self.mode
+
+ statistics.antennafield_device = self.metadata.get("antennafield", {}).get(
+ "name", str()
+ )
+ statistics.antenna_names = self.metadata.get("antennafield", {}).get(
+ "Antenna_Names_R", []
+ )
+ statistics.antenna_type = self.antennafield[:3].upper()
+ statistics.rcu_pcb_id = self.metadata.get("antennafield", {}).get(
+ "RCU_PCB_ID_R", []
+ )
+ statistics.rcu_pcb_version = self.metadata.get("antennafield", {}).get(
+ "RCU_PCB_version_R", []
+ )
+ statistics.antenna_status = self.metadata.get("antennafield", {}).get(
+ "Antenna_Status_R", []
+ ) # noqa
+ statistics.antenna_usage_mask = self.metadata.get("antennafield", {}).get(
+ "Antenna_Usage_Mask_R", []
+ ) # noqa
+ statistics.antenna_reference_itrf = self.metadata.get("antennafield", {}).get(
+ "Antenna_Reference_ITRF_R", []
+ ) # noqa
+
+ statistics.fpga_firmware_version = self.metadata.get("sdpfirmware", {}).get(
+ "FPGA_firmware_version_R", []
+ )
+ statistics.fpga_hardware_version = self.metadata.get("sdpfirmware", {}).get(
+ "FPGA_hardware_version_R", []
+ )
+
+ statistics.subband_frequencies = self.metadata.get("sdp", {}).get(
+ "subband_frequency_R", [[]]
+ )[0]
diff --git a/lofar_stingray/annotator/_bst_annotator.py b/lofar_stingray/annotator/_bst_annotator.py
new file mode 100644
index 0000000000000000000000000000000000000000..114825730fbddbbc74ba7b5ec34e7a5acc4676c9
--- /dev/null
+++ b/lofar_stingray/annotator/_bst_annotator.py
@@ -0,0 +1,45 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Class to aggregate BST statistics """
+
+from datetime import datetime
+from typing import Iterable
+
+import numpy
+
+from lofar_station_client.statistics.statistics_data import (
+ StatisticsDataFile,
+)
+
+from ._base import BaseAnnotator
+
+
+class BstAnnotator(BaseAnnotator):
+ """Class to aggregate BST statistics"""
+
+ def __init__(
+ self,
+ station: str,
+ antennafield: str,
+ metadata_packets: Iterable,
+ matrices: Iterable,
+ ):
+ super().__init__(station, antennafield, metadata_packets)
+ self.matrices = matrices
+
+ @property
+ def mode(self):
+ return "BST"
+
+ def write(self, statistics: StatisticsDataFile):
+ self.set_file_header(statistics)
+
+ for matrix in self.matrices:
+ timestamp = self.round_datetime_ms(
+ datetime.fromisoformat(matrix["timestamp"])
+ )
+
+ values = numpy.array(matrix["bst_data"], dtype=numpy.float32)
+
+ statistics[f"BST_{self.format_timestamp(timestamp)}"] = values
diff --git a/lofar_stingray/annotator/_sst_annotator.py b/lofar_stingray/annotator/_sst_annotator.py
new file mode 100644
index 0000000000000000000000000000000000000000..c55726e07f28b44cdac3c557a1f7c713243cc3c9
--- /dev/null
+++ b/lofar_stingray/annotator/_sst_annotator.py
@@ -0,0 +1,45 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Class to aggregate SST statistics """
+
+from datetime import datetime
+from typing import Iterable
+
+import numpy
+
+from lofar_station_client.statistics.statistics_data import (
+ StatisticsDataFile,
+)
+
+from ._base import BaseAnnotator
+
+
+class SstAnnotator(BaseAnnotator):
+ """Class to aggregate SST statistics"""
+
+ def __init__(
+ self,
+ station: str,
+ antennafield: str,
+ metadata_packets: Iterable,
+ matrices: Iterable,
+ ): # pylint: disable=too-many-arguments,too-many-positional-arguments
+ super().__init__(station, antennafield, metadata_packets)
+ self.matrices = matrices
+
+ @property
+ def mode(self):
+ return "SST"
+
+ def write(self, statistics: StatisticsDataFile):
+ self.set_file_header(statistics)
+
+ for matrix in self.matrices:
+ timestamp = self.round_datetime_ms(
+ datetime.fromisoformat(matrix["timestamp"])
+ )
+
+ values = numpy.array(matrix["sst_data"], dtype=numpy.float32)
+
+ statistics[f"SST_{self.format_timestamp(timestamp)}"] = values
diff --git a/lofar_stingray/annotator/_xst_annotator.py b/lofar_stingray/annotator/_xst_annotator.py
new file mode 100644
index 0000000000000000000000000000000000000000..fd8d714855655625733f46494d66620e1388f502
--- /dev/null
+++ b/lofar_stingray/annotator/_xst_annotator.py
@@ -0,0 +1,50 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Class to aggregate XST statistics """
+
+from datetime import datetime
+from typing import Iterable
+
+import numpy
+
+from lofar_station_client.statistics.statistics_data import (
+ StatisticsDataFile,
+)
+
+from ._base import BaseAnnotator
+
+
+class XstAnnotator(BaseAnnotator):
+ """Class to aggregate XST statistics packets."""
+
+ def __init__(
+ self,
+ station: str,
+ antennafield: str,
+ metadata_packets: Iterable,
+ matrices: Iterable,
+ ): # pylint: disable=too-many-arguments,too-many-positional-arguments
+ super().__init__(station, antennafield, metadata_packets)
+ self.matrices = matrices
+
+ @property
+ def mode(self):
+ return "XST"
+
+ def write(self, statistics: StatisticsDataFile):
+ self.set_file_header(statistics)
+
+ for matrix in self.matrices:
+ timestamp = self.round_datetime_ms(
+ datetime.fromisoformat(matrix["timestamp"])
+ )
+ subband = matrix["subband"]
+
+ real = numpy.array(matrix["xst_data_real"], dtype=numpy.float32)
+ imag = numpy.array(matrix["xst_data_imag"], dtype=numpy.float32)
+ values = real + imag * 1j
+
+ statistics[f"XST_{self.format_timestamp(timestamp)}_SB{subband:03}"] = (
+ values
+ )
diff --git a/lofar_stingray/aggregate.py b/lofar_stingray/extract.py
similarity index 72%
rename from lofar_stingray/aggregate.py
rename to lofar_stingray/extract.py
index b752357b674d2a0ffedf460992c71de9c55253a2..46baf51ca94f8d4257af71756f9c0949870e9d59 100644
--- a/lofar_stingray/aggregate.py
+++ b/lofar_stingray/extract.py
@@ -1,7 +1,7 @@
# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
# SPDX-License-Identifier: Apache-2.0
-"""Entry point to aggregate statistic packets"""
+"""Entry point to extract statistic matrices & metadata to store them as HDF5"""
import argparse
import logging
@@ -15,7 +15,7 @@ from lofar_station_client.statistics.statistics_data import StatisticsDataFile
from lofar_stingray._logging import setup_logging_handler
from lofar_stingray._minio import add_minio_argument, get_minio_client
-from lofar_stingray.aggregator import XstAggregator, SstAggregator, BstAggregator
+from lofar_stingray.annotator import XstAnnotator, SstAnnotator, BstAnnotator
from lofar_stingray.reader import S3PacketLoader
logger = logging.getLogger()
@@ -31,10 +31,6 @@ logger.addHandler(setup_logging_handler())
MAX_METADATA_LOOKBACK = timedelta(minutes=10, seconds=30)
-def _lower_str(s: str):
- return s.lower()
-
-
def _datetime_fromisoformat_with_tz(
datetime_str: str, default_tz: timezone = timezone.utc
) -> datetime:
@@ -49,27 +45,29 @@ def _datetime_fromisoformat_with_tz(
def _create_parser():
"""Define the parser"""
parser = argparse.ArgumentParser(
- description="Aggregates statistics packets from an S3 bucket into an HDF5 file."
+ description="Extract statistics matrices from an S3 bucket into an HDF5 file."
)
- parser.add_argument("station", type=_lower_str, help="the name of the station")
+ parser.add_argument("station", type=str.lower, help="the name of the station")
parser.add_argument(
"antennafield",
- type=_lower_str,
+ type=str.lower,
choices=["lba", "hba", "hba0", "hba1"],
help="the name of the antenna field",
)
parser.add_argument(
"type",
- type=_lower_str,
+ type=str.lower,
choices=["xst", "sst", "bst"],
help="the type of the statistics",
)
parser.add_argument("begin", type=_datetime_fromisoformat_with_tz)
parser.add_argument("end", type=_datetime_fromisoformat_with_tz)
parser.add_argument(
- "source", type=urlparse, help="the source bucket location of the data"
+ "source",
+ type=urlparse,
+ help="the source bucket location of the data",
)
- parser.add_argument("destination", type=urlparse, help="the target HDF5 file")
+ parser.add_argument("destination", type=urlparse, help="the destination HDF5 file")
add_minio_argument(parser)
return parser
@@ -114,41 +112,20 @@ def main() -> int:
logger.error("Statistics not available on S3")
return 1 # this is fatal
- # aggregate data
- aggregator_args = (
+ # combine matrices with metadata
+ annotator_args = (
args.station,
args.antennafield,
- metadata_storage.load_packets(
- args.begin - MAX_METADATA_LOOKBACK, args.end, "ts"
- ),
- statistics_storage.load_packets(args.begin, args.end),
+ metadata_storage.load_json(args.begin - MAX_METADATA_LOOKBACK, args.end, "ts"),
+ statistics_storage.load_json(args.begin, args.end),
)
- nr_signal_inputs = 192 # default LBA
- first_signal_input_index = 0
- match args.antennafield:
- case "hba":
- nr_signal_inputs = 96
- case "hba0":
- nr_signal_inputs = 48
- case "hba1":
- nr_signal_inputs = 48
- first_signal_input_index = 48
-
if args.type == "sst":
- aggregator = SstAggregator(
- *aggregator_args,
- nr_signal_inputs=nr_signal_inputs,
- first_signal_input_index=first_signal_input_index,
- )
+ annotator = SstAnnotator(*annotator_args)
elif args.type == "xst":
- aggregator = XstAggregator(
- *aggregator_args,
- nr_signal_inputs=nr_signal_inputs,
- first_signal_input_index=first_signal_input_index,
- )
+ annotator = XstAnnotator(*annotator_args)
else:
- aggregator = BstAggregator(*aggregator_args)
+ annotator = BstAnnotator(*annotator_args)
tf = (
tempfile.NamedTemporaryFile(delete=False) # pylint: disable=consider-using-with
@@ -157,12 +134,12 @@ def main() -> int:
)
with create_hdf5(tf, StatisticsDataFile) as statistics:
- aggregator.convert(statistics)
+ annotator.write(statistics)
- logger.info("Aggregation completed.")
+ logger.info("Extraction completed.")
if args.destination.scheme == "s3":
tf.close()
- logger.info("Uploading %s", args.destination)
+ logger.info("Uploading to %s", args.destination)
minio_client.fput_object(
args.destination.netloc, args.destination.path, tf.name
)
diff --git a/lofar_stingray/forward.py b/lofar_stingray/forward.py
new file mode 100644
index 0000000000000000000000000000000000000000..c0bfb74d6b8abcbf4efa8bdfbd965d32a13c9f6a
--- /dev/null
+++ b/lofar_stingray/forward.py
@@ -0,0 +1,106 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Stingray forwarder application """
+
+import argparse
+import logging
+import sys
+
+from prometheus_client import start_http_server, disable_created_metrics, Counter, Gauge
+
+from lofar_stingray import streams
+from lofar_stingray._logging import setup_logging_handler
+from lofar_stingray._minio import get_minio_client, add_minio_argument
+from lofar_stingray._prometheus import add_prometheus_argument
+
+logger = logging.getLogger()
+logger.setLevel(logging.DEBUG)
+logger.addHandler(setup_logging_handler())
+
+
+def _create_parser():
+ """Define the parser"""
+ parser = argparse.ArgumentParser(
+ description="Copy a stream of statistics packets or json"
+ " (matrices, metadata) from a source to a destination."
+ )
+ parser.add_argument(
+ "source", type=str, help="the source of the data (file, udp, tcp, zmq)"
+ )
+ parser.add_argument(
+ "destination",
+ type=str,
+ help="the destination location to use (file, udp, tcp, s3)",
+ )
+ parser.add_argument(
+ "-d",
+ "--datatype",
+ choices=["packet", "json"],
+ default="packet",
+ help="type of data that is copied",
+ )
+ add_prometheus_argument(parser)
+ add_minio_argument(parser)
+ return parser
+
+
+def main(argv=None):
+ """Parser main method"""
+ logger.debug("Starting stingray forwarder")
+ parser = _create_parser()
+ args = parser.parse_args(argv or sys.argv[1:])
+ logger.info("Using source %s", args.source)
+ logger.info("Using destination %s", args.destination)
+
+ # start prometheus server
+ disable_created_metrics()
+ start_http_server(args.metrics_port)
+
+ # initialise metrics
+ metric_nr_bytes_read = Gauge(
+ "nr_bytes_read",
+ "Number of bytes read from the input",
+ )
+ metric_nr_bytes_read.inc(0)
+ metric_nr_bytes_written = Gauge(
+ "nr_bytes_written",
+ "Number of bytes written to the output",
+ )
+ metric_nr_bytes_written.inc(0)
+
+ metric_nr_packets_processed = Counter(
+ "nr_packets_processed",
+ "Number of packets read from the input and written to the output",
+ )
+ metric_nr_packets_processed.inc(0)
+
+ # obtain s3 client, if needed
+ if args.destination.startswith("s3:"):
+ minio_client = get_minio_client(args)
+ else:
+ minio_client = None
+
+ with streams.create(args.destination, True, minio_client) as writer:
+ with streams.create(args.source, False, minio_client) as reader:
+ if args.datatype == "packet":
+ for packet in reader:
+ writer.put_packet(packet)
+
+ metric_nr_packets_processed.inc()
+ metric_nr_bytes_read.set(reader.num_bytes_read)
+ metric_nr_bytes_written.set(writer.num_bytes_written)
+
+ elif args.datatype == "json":
+ while data := reader.get_json():
+ writer.put_json(data)
+
+ metric_nr_packets_processed.inc()
+ metric_nr_bytes_read.set(reader.num_bytes_read)
+ metric_nr_bytes_written.set(writer.num_bytes_written)
+
+ logger.info("End of packet stream. Shutting down.")
+
+
+if __name__ == "__main__":
+ main()
diff --git a/lofar_stingray/publish.py b/lofar_stingray/publish.py
new file mode 100644
index 0000000000000000000000000000000000000000..0383bf047b3f31acfec87e987cc7c722ddfddf4e
--- /dev/null
+++ b/lofar_stingray/publish.py
@@ -0,0 +1,263 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Stingray application that transforms statistics packets into matrices,
+ which are published through ZMQ. """
+
+import argparse
+import logging
+import queue
+import sys
+import time
+from typing import Dict, Generator
+
+from lofar_station_client.zeromq.publisher import ZeroMQPublisher
+from lofar_station_client.statistics.packets import StatisticsPacket
+from prometheus_client import start_http_server, disable_created_metrics, Counter, Gauge
+
+from lofar_stingray import streams
+from lofar_stingray._logging import setup_logging_handler
+from lofar_stingray._prometheus import add_prometheus_argument
+from lofar_stingray.aggregator import (
+ BstAggregator,
+ SstAggregator,
+ XstAggregator,
+ CollectPacketsPerTimestamp,
+)
+from lofar_stingray.aggregator.message import Message
+
+logger = logging.getLogger()
+logger.setLevel(logging.DEBUG)
+logger.addHandler(setup_logging_handler())
+
+
+def nr_signal_inputs(antenna_field: str):
+ """Return the number of SDP signal inputs for the antenna fields."""
+ match antenna_field:
+ case "hba":
+ return 96
+ case "hba0":
+ return 48
+ case "hba1":
+ return 48
+ case "lba":
+ return 192
+
+
+def first_signal_input_index(antenna_field: str):
+ """Return the index of the first signal input in the statistics packets from SDP."""
+ match antenna_field:
+ case "hba":
+ return 0
+ case "hba0":
+ return 0
+ case "hba1":
+ return 48
+ case "lba":
+ return 0
+
+
+def packets_to_messages(
+ station: str, antenna_field: str, mode: str, packets: list[StatisticsPacket]
+) -> list[Message]:
+ """Convert a set of packages into one or more message payloads for ZMQ"""
+
+ if mode == "sst":
+ aggregator = SstAggregator(
+ nr_signal_inputs=nr_signal_inputs(antenna_field),
+ first_signal_input_index=first_signal_input_index(antenna_field),
+ )
+ elif mode == "xst":
+ aggregator = XstAggregator(
+ nr_signal_inputs=nr_signal_inputs(antenna_field),
+ first_signal_input_index=first_signal_input_index(antenna_field),
+ )
+ else:
+ aggregator = BstAggregator()
+
+ # combine packets into a matrix
+ matrix = aggregator.packets_to_matrix([dict(packet) for packet in packets])
+ messages = aggregator.matrix_to_messages(matrix)
+
+ # add header
+ packet = packets[0]
+ for m in messages:
+ m.timestamp = packet.timestamp
+
+ m.station = station
+ m.antenna_field = antenna_field
+ m.type = mode
+
+ m.packet_version = packet.header.version_id
+ m.station_id = packet.header.station_id
+ m.station_info = packet.header.station_info
+ m.source_info = packet.header.source_info
+ m.observation_id = packet.header.observation_id
+ m.clock_mhz = packet.header.t_adc
+ m.integration_interval = packet.header.integration_interval
+
+ return messages
+
+
+def read_packets(
+ stream: streams.Stream, metric_labels: Dict[str, str]
+) -> Generator[StatisticsPacket, None, None]:
+ """Generator returning all packets read from the given stream until EOF."""
+
+ metric_labels_keys = list(metric_labels.keys())
+
+ metric_nr_bytes_received = Gauge(
+ "nr_bytes_received", "Number of bytes received", metric_labels_keys
+ ).labels(**metric_labels)
+ metric_nr_packets_received = Counter(
+ "nr_packets_received",
+ "Number of packets received and decoded, per FPGA (or -1 if FPGA is unknown)",
+ metric_labels_keys + ["fpga"],
+ )
+ metric_nr_payload_errors = Counter(
+ "nr_payload_errors",
+ "Number of packets that were marked by the FPGA for having a payload error",
+ metric_labels_keys + ["fpga"],
+ )
+ metric_nr_decoding_errors = Counter(
+ "nr_decoding_errors",
+ "Number of packets that could not be decoded as a valid statistics packet",
+ metric_labels_keys,
+ ).labels(**metric_labels)
+
+ # provide a value to make the metric already available
+ metric_nr_bytes_received.inc(0)
+ metric_nr_packets_received.labels(**metric_labels, fpga=-1).inc(0)
+ metric_nr_payload_errors.labels(**metric_labels, fpga=-1).inc(0)
+ metric_nr_decoding_errors.inc(0)
+
+ while True:
+ try:
+ packet = stream.get_packet()
+ except EOFError:
+ return
+ except ValueError:
+ metric_nr_packets_received.labels(**metric_labels, fpga=-1).inc()
+ metric_nr_decoding_errors.inc()
+ continue
+ finally:
+ metric_nr_bytes_received.set(stream.num_bytes_read)
+
+ metric_nr_packets_received.labels(
+ **metric_labels, fpga=packet.header.gn_index
+ ).inc()
+
+ if packet.header.payload_error:
+ metric_nr_payload_errors.labels(
+ **metric_labels, fpga=packet.header.gn_index
+ ).inc()
+ continue
+
+ yield packet
+
+
+def _create_parser():
+ """Define the parser"""
+ parser = argparse.ArgumentParser(
+ description="Records a stream of statistics"
+ " packets and publish them as matrices on ZMQ."
+ )
+ parser.add_argument("station", type=str.lower, help="the station name")
+ parser.add_argument(
+ "antenna_field",
+ type=str.lower,
+ choices=["lba", "hba", "hba0", "hba1"],
+ help="the antenna-field name",
+ )
+ parser.add_argument(
+ "type",
+ type=str.lower,
+ choices=["bst", "sst", "xst"],
+ help="the type of statistic to write",
+ )
+ parser.add_argument("source", type=str, help="source of the packets")
+ parser.add_argument(
+ "--port", type=int, default=6001, help="the ZMQ port number to publish on"
+ )
+ add_prometheus_argument(parser)
+ return parser
+
+
+def send_message(publisher: ZeroMQPublisher, message) -> bool:
+ """Send one message over the ZMQ bus. Return whether
+ emission was succesful."""
+
+ try:
+ publisher.send(message.zmq_payload())
+ return True
+ except queue.Full:
+ logger.warning("Could not post message: queue is full")
+ return False
+
+
+def main(argv=None):
+ """Parser main method"""
+ logger.debug("Starting statistics matrix publisher")
+ parser = _create_parser()
+ args = parser.parse_args(argv or sys.argv[1:])
+
+ # start prometheus server
+ disable_created_metrics()
+ start_http_server(args.metrics_port)
+
+ # initialise metrics
+ metric_labels = {
+ "antenna_field": args.antenna_field,
+ "type": args.type,
+ }
+
+ metric_nr_messages_constructed = Counter(
+ "nr_messages_constructed",
+ "Number of messages constructed ZMQ",
+ list(metric_labels.keys()),
+ ).labels(**metric_labels)
+ metric_nr_messages_constructed.inc(0)
+
+ metric_nr_messages_published = Counter(
+ "nr_messages_published",
+ "Number of messages published on ZMQ",
+ list(metric_labels.keys()),
+ ).labels(**metric_labels)
+ metric_nr_messages_published.inc(0)
+
+ # start publishing
+ zmq_url = f"tcp://*:{args.port}"
+ topic = f"{args.type}/{args.antenna_field}/{args.station}"
+ logger.info("Publishing on %s with topic %s", zmq_url, topic)
+ with ZeroMQPublisher(zmq_url, [topic]) as publisher:
+ logger.info("Waiting for publisher to start...")
+ while not publisher.is_running:
+ time.sleep(1)
+ logger.info("Publisher started")
+
+ collector = CollectPacketsPerTimestamp()
+
+ # processor function for each timestamp
+ def process_packets(packets):
+ for message in packets_to_messages(
+ args.station, args.antenna_field, args.type, packets
+ ):
+ metric_nr_messages_constructed.inc()
+ if send_message(publisher, message):
+ metric_nr_messages_published.inc()
+
+ # process stream
+ with streams.create(args.source) as stream:
+ for packet in read_packets(stream, metric_labels):
+ for packets_of_same_timestamp in collector.put_packet(packet):
+ process_packets(packets_of_same_timestamp)
+
+ # process remainder
+ for packets_of_same_timestamp in collector.done():
+ process_packets(packets_of_same_timestamp)
+
+ logger.info("End of packet stream. Shutting down.")
+
+
+if __name__ == "__main__":
+ main()
diff --git a/lofar_stingray/reader/_s3_packet_loader.py b/lofar_stingray/reader/_s3_packet_loader.py
index dfaac02206d621e95331178832242c2fe395ba92..eec63cdec1a4ef57ad4416ddd44d915da2d470b9 100644
--- a/lofar_stingray/reader/_s3_packet_loader.py
+++ b/lofar_stingray/reader/_s3_packet_loader.py
@@ -104,8 +104,8 @@ class S3PacketLoader: # pylint: disable=too-few-public-methods
)
return False
- def load_packets(self, start: datetime, end: datetime, ts_field="timestamp"):
- """Loads packets from the S3 storage until no matching packets are found"""
+ def load_json(self, start: datetime, end: datetime, ts_field="timestamp") -> list:
+ """Loads json lines from the S3 storage until no matching packets are found"""
for obj in self._list_objects_after(start):
packets = []
diff --git a/lofar_stingray/record.py b/lofar_stingray/record.py
deleted file mode 100644
index 5bf61eda555e8cc34c407707886f83c70c247aa8..0000000000000000000000000000000000000000
--- a/lofar_stingray/record.py
+++ /dev/null
@@ -1,55 +0,0 @@
-# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
-# SPDX-License-Identifier: Apache-2.0
-
-""" Stingray recorder application """
-
-import argparse
-import json
-import logging
-from urllib.parse import urlparse
-
-from lofar_station_client.statistics import receivers
-
-from lofar_stingray._logging import setup_logging_handler
-from lofar_stingray._minio import get_minio_client, add_minio_argument
-from lofar_stingray.utils import StingrayJsonEncoder
-from lofar_stingray.writer import Storage
-
-logger = logging.getLogger()
-logger.setLevel(logging.DEBUG)
-logger.addHandler(setup_logging_handler())
-
-
-def _create_parser():
- """Define the parser"""
- parser = argparse.ArgumentParser(
- description="Records a stream of statistics packets onto an S3 bucket."
- )
- parser.add_argument("source", type=str, help="the source of the data")
- parser.add_argument(
- "target", type=urlparse, help="the target bucket location to use"
- )
- add_minio_argument(parser)
- return parser
-
-
-def main():
- """Parser main method"""
- logger.debug("Starting stingray")
- parser = _create_parser()
- args = parser.parse_args()
- minio_client = get_minio_client(args)
- logger.info("Using source %s", args.source)
- logger.info("Using target %s", args.target)
- storage = Storage(args.target.netloc, args.target.path, minio_client)
-
- with storage:
- for packet in receivers.create(args.source):
- data = dict(packet)
- storage.write_line(json.dumps(data, cls=StingrayJsonEncoder))
-
- logger.info("End of packet stream. Shutting down.")
-
-
-if __name__ == "__main__":
- main()
diff --git a/lofar_stingray/streams/__init__.py b/lofar_stingray/streams/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..2e339ef85f924898300f0ee0843ba11a65d798fa
--- /dev/null
+++ b/lofar_stingray/streams/__init__.py
@@ -0,0 +1,20 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Different types of senders/receivers for statistics"""
+
+from ._create import create
+from ._file import FileStream
+from ._stream import Stream
+from ._tcp import TCPStream
+from ._udp import UDPStream
+from ._zmq import ZeroMQReceiver
+
+__all__ = [
+ "create",
+ "FileStream",
+ "TCPStream",
+ "UDPStream",
+ "Stream",
+ "ZeroMQReceiver",
+]
diff --git a/lofar_stingray/streams/_create.py b/lofar_stingray/streams/_create.py
new file mode 100644
index 0000000000000000000000000000000000000000..d4816e276d4b7a0700f4a8db61cc7d929f59cdf3
--- /dev/null
+++ b/lofar_stingray/streams/_create.py
@@ -0,0 +1,39 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Create receiver based on uri"""
+
+import os
+from typing import Optional
+from urllib.parse import urlsplit
+
+from minio import Minio
+
+from ._file import FileStream
+from ._tcp import TCPStream
+from ._udp import UDPStream
+from ._zmq import ZeroMQReceiver
+from ._s3 import StorageStream
+
+
+def create(uri, writer=False, minio_client: Optional[Minio] = None):
+ """Create a Stream based on the given URI"""
+ parsed = urlsplit(uri)
+ if parsed.scheme == "tcp":
+ return TCPStream(parsed.hostname, parsed.port)
+ if parsed.scheme == "udp":
+ return UDPStream(parsed.hostname, parsed.port, writer)
+ if parsed.scheme == "file":
+ return FileStream(
+ parsed.path, os.O_WRONLY | os.O_CREAT if writer else os.O_RDONLY
+ )
+ if parsed.scheme == "s3":
+ return StorageStream(parsed.netloc, parsed.path, minio_client)
+ if parsed.scheme.startswith("zmq"):
+ if writer:
+ raise ValueError(f"Provided uri '{uri}' is not supported for writing")
+ return ZeroMQReceiver(
+ f"{parsed.scheme[4:]}://{parsed.netloc}", [parsed.path[1:]]
+ )
+
+ raise ValueError(f"Provided uri '{uri}' is not supported")
diff --git a/lofar_stingray/streams/_file.py b/lofar_stingray/streams/_file.py
new file mode 100644
index 0000000000000000000000000000000000000000..c7a49d8636f0bf9e82d4910e024624d664f535f1
--- /dev/null
+++ b/lofar_stingray/streams/_file.py
@@ -0,0 +1,30 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""FileStream"""
+
+import os
+
+from ._stream import Stream
+
+
+class FileStream(Stream):
+ """File receiver"""
+
+ def __init__(self, filename, mode=os.O_RDONLY):
+ self.filename = filename
+ self.fileno = None
+ self.mode = mode
+ super().__init__()
+
+ def open(self):
+ self.fileno = os.open(self.filename, self.mode)
+
+ def close(self):
+ if self.fileno:
+ os.close(self.fileno)
+ self.fileno = None
+
+ @property
+ def fdesc(self):
+ return self.fileno
diff --git a/lofar_stingray/streams/_s3.py b/lofar_stingray/streams/_s3.py
new file mode 100644
index 0000000000000000000000000000000000000000..115c680cfdb44c12bf74a1f72c37066bb916cab9
--- /dev/null
+++ b/lofar_stingray/streams/_s3.py
@@ -0,0 +1,24 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""StorageStream"""
+
+import json
+
+from lofar_station_client.statistics.packets import StatisticsPacket
+
+from lofar_stingray.utils import StingrayJsonEncoder
+from lofar_stingray.writer import Storage
+
+
+class StorageStream(Storage):
+ """File receiver"""
+
+ def put_packet(self, packet: StatisticsPacket):
+ """Write a packet to the stream, encoded as a line of JSON."""
+ data = dict(packet)
+ self.put_json(data)
+
+ def put_json(self, data: dict):
+ """Write a line of text to the stream."""
+ self.write_line(json.dumps(data, cls=StingrayJsonEncoder))
diff --git a/lofar_stingray/streams/_socket.py b/lofar_stingray/streams/_socket.py
new file mode 100644
index 0000000000000000000000000000000000000000..d028b7ac21b3b98fa1822f61b039bb6438493383
--- /dev/null
+++ b/lofar_stingray/streams/_socket.py
@@ -0,0 +1,47 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""UDP Stream"""
+import socket
+import logging
+
+from lofar_station_client.statistics.packets import StatisticsPacket
+
+from ._stream import Stream
+
+logger = logging.getLogger()
+
+
+class SocketStream(Stream):
+ """Abstract Stream modelling a socket."""
+
+ def __init__(self):
+ self._fdesc: int = None
+ self.sock: socket.socket = None
+ super().__init__()
+
+ def close(self):
+ if self.sock:
+ self.sock.close()
+ self.sock = None
+ self._fdesc = None
+
+ def open(self):
+ # subclasses should set self.sock
+ self._fdesc = self.sock.fileno()
+
+ def put_packet(self, packet: StatisticsPacket):
+ # Caller should make sure not to spam this too fast
+ # for the receiver to handle.
+ self.sock.send(packet.raw)
+ self.num_bytes_written += len(packet.raw)
+
+ def reconnect(self):
+ """Reconnect to socket"""
+ self.close()
+ self.open()
+ return True
+
+ @property
+ def fdesc(self):
+ return self._fdesc
diff --git a/lofar_stingray/streams/_stream.py b/lofar_stingray/streams/_stream.py
new file mode 100644
index 0000000000000000000000000000000000000000..7fd522a11d22a0da981e40732deb66bf1133e906
--- /dev/null
+++ b/lofar_stingray/streams/_stream.py
@@ -0,0 +1,120 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Stream base class"""
+
+import os
+from abc import ABC, abstractmethod
+import json
+
+from lofar_station_client.statistics.packets import StatisticsPacket, StatisticsHeader
+
+from lofar_stingray.utils import StingrayJsonEncoder
+
+
+class Stream(ABC):
+ """Reads data from a file descriptor."""
+
+ HEADER_LENGTH = 32
+
+ def __init__(self):
+ self.num_bytes_read: int = 0
+ self.num_bytes_written: int = 0
+
+ def __enter__(self):
+ """Open the stream as part of a context manager."""
+ self.open()
+ return self
+
+ def __exit__(self, type_, value, exc):
+ """Close the stream as part of a context manager."""
+ self.close()
+ return False
+
+ def __del__(self):
+ # Make sure we don't leak
+ self.close()
+
+ def __iter__(self):
+ """Iterates over all packets in the stream."""
+ return self
+
+ def __next__(self) -> StatisticsPacket:
+ """Return next packet."""
+ try:
+ return self.get_packet()
+ except EOFError as exc:
+ raise StopIteration from exc
+
+ @property
+ @abstractmethod
+ def fdesc(self):
+ """Provide the file descriptor for the read function"""
+
+ def open(self):
+ """Obtain I/O resources. Is reentrant."""
+
+ def close(self):
+ """Release I/O resources. Is reentrant."""
+
+ def get_packet(self) -> StatisticsPacket:
+ """Read exactly one statistics packet from the stream."""
+
+ # read only the header, to compute the size of the packet
+ header_data = self.read_data(self.HEADER_LENGTH)
+ header = StatisticsHeader(header_data)
+
+ # read the rest of the packet (payload)
+ payload_length = header.expected_size() - len(header_data)
+ payload = self.read_data(payload_length)
+
+ # add payload to the header, and return the full packet
+ return StatisticsPacket(header, payload)
+
+ def get_json(self) -> dict:
+ """Read exactly one JSON element from the stream. Return as dict."""
+
+ # Streams are not required to implement this
+ raise NotImplementedError
+
+ def _read(self, length: int) -> bytes:
+ """Low-level read function to fetch at most "length" (>1) bytes. Returns
+ nothing if there is no data left."""
+
+ data = os.read(self.fdesc, length)
+ self.num_bytes_read += len(data)
+
+ return data
+
+ def read_data(self, data_length: int) -> bytes:
+ """Read exactly data_length bytes from the stream."""
+
+ data = b""
+ while len(data) < data_length:
+ # try to read the remainder.
+ # NOTE: recv() may return less data than requested, and returns 0
+ # if there is nothing left to read (end of stream)
+ more_data = self._read(data_length - len(data))
+ if not more_data:
+ # connection got dropped
+ raise EOFError("End of stream")
+
+ data += more_data
+
+ return data
+
+ def write_data(self, data: bytes):
+ """Write an amount of data to the stream."""
+
+ os.write(self.fdesc, data)
+ self.num_bytes_written += len(data)
+
+ def put_packet(self, packet: StatisticsPacket):
+ """Emit a packet."""
+
+ # For most streams, this is in binary
+ self.write_data(packet.raw)
+
+ def put_json(self, data: dict):
+ """Emit a dict as JSON on the stream."""
+ self.write_data(json.dumps(data, cls=StingrayJsonEncoder).encode() + b"\n")
diff --git a/lofar_stingray/streams/_tcp.py b/lofar_stingray/streams/_tcp.py
new file mode 100644
index 0000000000000000000000000000000000000000..cb5447c34ee1bcead1dfa0fbfe0e19dbb79dbbae
--- /dev/null
+++ b/lofar_stingray/streams/_tcp.py
@@ -0,0 +1,32 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""TCP Stream"""
+import socket
+
+from ._socket import SocketStream
+
+
+class TCPStream(SocketStream):
+ """TCP Stream"""
+
+ def __init__(self, host, port):
+ self.host = host
+ self.port = port
+ super().__init__()
+
+ def open(self):
+ self.sock = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
+
+ try:
+ self.sock.connect((self.host, self.port))
+ except OSError as ex:
+ raise ConnectionError(
+ f"Could not connect to {self.host}:{self.port}"
+ ) from ex
+
+ super().open()
+
+ def _read(self, length):
+ # On Windows, we cannot use os.read to read from sockets
+ return self.sock.recv(length)
diff --git a/lofar_stingray/streams/_udp.py b/lofar_stingray/streams/_udp.py
new file mode 100644
index 0000000000000000000000000000000000000000..decac9566ca1d6bd4a391f5a126628eb12a4c51b
--- /dev/null
+++ b/lofar_stingray/streams/_udp.py
@@ -0,0 +1,97 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""UDP Stream"""
+import socket
+import logging
+
+from lofar_station_client.statistics.packets import StatisticsPacket
+
+from ._socket import SocketStream
+
+logger = logging.getLogger()
+
+# Maximum size of an Ethernet Jumbo frame
+MAX_ETH_FRAME_SIZE = 9000
+
+
+class UDPStream(SocketStream):
+ """UDP Stream"""
+
+ POLL_TIMEOUT = 0.1
+ RECV_BUFFER_SIZE = 16 * 1024 * 1024
+
+ def __init__(
+ self,
+ host,
+ port,
+ writer: bool = False,
+ ):
+ self.host = host
+ self.port = port
+ self.writer = writer
+ super().__init__()
+
+ def open(self):
+ self.sock = socket.socket(socket.AF_INET, socket.SOCK_DGRAM)
+
+ # Allow binding even if there are still lingering packets in the kernel for a
+ # previous listener that already died. If not, we get an
+ # "Address already in use". This is stock socket usage.
+ self.sock.setsockopt(socket.SOL_SOCKET, socket.SO_REUSEADDR, 1)
+
+ # Increase buffers to prevent data loss when our class isn't listening.
+ self.sock.setsockopt(socket.SOL_SOCKET, socket.SO_RCVBUF, self.RECV_BUFFER_SIZE)
+
+ # Check whether OS could increase buffer. NB: The kernel typically doubles
+ # the requested size to account for bookkeeping overhead,
+ # see https://linux.die.net/man/7/socket
+ actual_recv_buffer_size = self.sock.getsockopt(
+ socket.SOL_SOCKET, socket.SO_RCVBUF
+ )
+
+ if actual_recv_buffer_size < self.RECV_BUFFER_SIZE:
+ # Typically this is the host OS not allowing us to allocate buffers
+ # of this size. Try increasing it using (as root):
+ # sysctl -w net.core.rmem_max=$((16*1024*1024))
+ logger.error(
+ "OS does not allow requested buffer size. "
+ "This could result in UDP packet loss. "
+ "Requested %s bytes, got %s. Verify "
+ 'if "sysctl net.core.rmem_max" is sufficiently large.',
+ self.RECV_BUFFER_SIZE,
+ actual_recv_buffer_size,
+ )
+
+ # specify what host and port to listen on
+ if self.writer:
+ self.sock.connect((self.host, self.port))
+ else:
+ self.sock.bind((self.host, self.port))
+
+ # Make sure we can stop receiving packets even if none arrive.
+ # Without this, the recvmsg() call blocks indefinitely if no packet arrives.
+ self.sock.settimeout(self.POLL_TIMEOUT)
+
+ super().open()
+
+ def read_data(self, data_length) -> bytes:
+ # On Windows, we cannot use os.read to read from sockets
+ (data, _ancdata, _msg_flags, _address) = self.sock.recvmsg(data_length)
+ self.num_bytes_read += len(data)
+
+ return data
+
+ def read_message(self) -> bytes:
+ """Read one datagram from UDP and return its payload."""
+
+ while True:
+ try:
+ return self.read_data(MAX_ETH_FRAME_SIZE)
+ except TimeoutError:
+ pass
+
+ def get_packet(self) -> StatisticsPacket:
+ # A packet is equal to one UDP datagram
+ data = self.read_message()
+ return StatisticsPacket.parse_packet(data)
diff --git a/lofar_stingray/streams/_zmq.py b/lofar_stingray/streams/_zmq.py
new file mode 100644
index 0000000000000000000000000000000000000000..f4959377726d5c11ef2e68b4d26c74f1866a8d79
--- /dev/null
+++ b/lofar_stingray/streams/_zmq.py
@@ -0,0 +1,85 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""ZeroMQ Receiver"""
+import datetime
+import json
+import logging
+from typing import Union, Tuple, List
+
+import zmq
+
+from lofar_station_client.zeromq.subscriber import ZeroMQSubscriber
+
+logger = logging.getLogger()
+
+
+class ZeroMQReceiver(ZeroMQSubscriber):
+ """ZeroMQ Receiver"""
+
+ def __init__(
+ self, uri: str, topics: List[str], content_type: str = "application/json"
+ ):
+ super().__init__(uri, topics)
+
+ # pylint: disable=fixme
+ # TODO: pull topics from URI to create fully configurable and routable end point
+ self._topics = topics
+ self._content_type = content_type
+
+ self.num_bytes_read = 0
+
+ def open(self):
+ """Open I/O resources"""
+
+ def __enter__(self):
+ self.open()
+ return self
+
+ def __exit__(self, type_, value, exc):
+ self.close()
+ return False
+
+ def __iter__(self):
+ """Iterates over all packets in the stream."""
+ return self
+
+ def read_message(self) -> Tuple[str, datetime.datetime, Union[dict, str, bytes]]:
+ """Read a message, and return it as a (topic, timestamp, message) tuple."""
+ while True:
+ # parse the message according to the format we publish them with
+ topic, timestamp, msg = self.recv()
+ self.num_bytes_read += len(msg)
+
+ if self._content_type == "application/json":
+ return topic, timestamp, json.loads(msg.decode())
+ if self._content_type == "text/plain":
+ return topic, timestamp, msg.decode()
+
+ return topic, timestamp, msg
+
+ def __next__(self) -> Union[str, bytes]:
+ """Read the next message."""
+ try:
+ _topic, _timestamp, msg = self.read_message()
+ return msg
+ except zmq.ZMQError as e:
+ if e.errno == zmq.ETERM:
+ raise StopIteration from e
+ raise
+
+ def get_json(self) -> dict:
+ """Read a message containing a JSON payload,
+ returned as a dict, or None if the stream was closed."""
+ try:
+ _topic, _timestamp, msg = self.read_message()
+ return msg
+ except zmq.ZMQError as e:
+ if e.errno == zmq.ETERM:
+ return None
+ raise
+
+ @property
+ def content_type(self):
+ """Returns the content type of the receiver"""
+ return self._content_type
diff --git a/lofar_stingray/utils/_stringray_json_encoder.py b/lofar_stingray/utils/_stringray_json_encoder.py
index 57b3685d8a74d5e3766a9af01ec55cc2cc966a7c..41c11c1dd01bf6c929e9e61119ed9017ead6df8a 100644
--- a/lofar_stingray/utils/_stringray_json_encoder.py
+++ b/lofar_stingray/utils/_stringray_json_encoder.py
@@ -14,6 +14,10 @@ class StingrayJsonEncoder(JSONEncoder):
def default(self, o):
if isinstance(o, numpy.ndarray):
return o.tolist()
+ if isinstance(o, numpy.integer):
+ return int(o)
+ if isinstance(o, numpy.floating):
+ return float(o)
if isinstance(o, datetime):
return o.isoformat()
return JSONEncoder.default(self, o)
diff --git a/lofar_stingray/writer.py b/lofar_stingray/writer.py
index 5204b91ac34ac406b27c646297f8ae7f2ea3060e..daecf92496cddaaa7b987c10659513a81c60b32e 100644
--- a/lofar_stingray/writer.py
+++ b/lofar_stingray/writer.py
@@ -48,10 +48,12 @@ class Storage:
self.current_block: Optional[Block] = None
self.prefix = prefix
self.duration = duration
+ self.num_bytes_written = 0
self._init_bucket()
def __enter__(self):
self.current_block = Block(self.duration)
+ return self
def __exit__(self, *args):
if self.current_block:
@@ -107,5 +109,7 @@ class Storage:
self.current_block = None
asyncio.run(self._complete_current_block(block))
self.current_block = Block(self.duration)
- self.current_block.write(line.encode())
- self.current_block.write(b"\n")
+
+ data = line.encode() + b"\n"
+ self.current_block.write(data)
+ self.num_bytes_written += len(data)
diff --git a/requirements.txt b/requirements.txt
index de2d558118c7994fef24cd958a304eb72691b15f..872d79b1bf4df5e4aa9869fdfef6fe598753f6c4 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,5 +1,7 @@
numpy
minio~=7.1.17
-lofar-station-client>=0.19.2 # Apache 2
+lofar-station-client>=0.20 # Apache 2
setuptools~=68.2.0
logfmter # MIT
+prometheus-client # Apache 2
+pyzmq>=24 # LGPL + BSD
diff --git a/setup.cfg b/setup.cfg
index c6f7625c1dcb6cf78bc03fb50e90c1c9ca6e92c7..d8ef1e48e998664046fe8930eb420617744da12f 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -30,8 +30,9 @@ install_requires = file: requirements.txt
[options.entry_points]
console_scripts =
- l2ss-stingray-record = lofar_stingray.record:main
- l2ss-stingray-aggregate = lofar_stingray.aggregate:main
+ l2ss-stingray-forward = lofar_stingray.forward:main
+ l2ss-stingray-extract = lofar_stingray.extract:main
+ l2ss-stingray-publish = lofar_stingray.publish:main
[flake8]
max-line-length = 88
diff --git a/tests/aggregator/bst.json b/tests/aggregator/bst.json
index 068269653e6432434ff298c669fa0ce3a57c4432..7c518b3540cab6c5f268ef0ab286262ab6c949b0 100644
--- a/tests/aggregator/bst.json
+++ b/tests/aggregator/bst.json
@@ -1,5 +1,2 @@
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diff --git a/tests/aggregator/sst.json b/tests/aggregator/sst.json
index c0ae17148af651711c97e3f41df80c6fee4a7751..c798746a034aea46f0d8b58a8299de67818faaa2 100644
--- a/tests/aggregator/sst.json
+++ b/tests/aggregator/sst.json
@@ -1,15 +1,3 @@
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@@ -22,123 +10,3 @@
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-{"marker": "S", "marker_raw": 83, "version_id": 5, "observation_id": 0, "station_id": 0, "station_info": {"_raw": 0, "station_id": 0, "antenna_field_index": 0}, "source_info": {"_raw": 4106, "antenna_band_index": 0, "nyquist_zone_index": 0, "t_adc": 1, "fsub_type": 0, "payload_error": false, "beam_repositioning_flag": false, "gn_index": 10, "subband_calibrated_flag": false}, "block_period_raw": 5120, "block_period": 5.12e-06, "block_serial_number": 318777396679687, "timestamp": "2021-09-20T12:17:50.999997+00:00", "f_adc": 200, "data_id": {"signal_input_index": 130, "_raw": 130}, "integration_interval_raw": 195311, "integration_interval": 0.99999232, "nof_signal_inputs": 1, "nof_bytes_per_statistic": 8, "nof_statistics_per_packet": 512, "payload": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]}
-{"marker": "S", "marker_raw": 83, "version_id": 5, "observation_id": 0, "station_id": 0, "station_info": {"_raw": 0, "station_id": 0, "antenna_field_index": 0}, "source_info": {"_raw": 4106, "antenna_band_index": 0, "nyquist_zone_index": 0, "t_adc": 1, "fsub_type": 0, "payload_error": false, "beam_repositioning_flag": false, "gn_index": 10, "subband_calibrated_flag": false}, "block_period_raw": 5120, "block_period": 5.12e-06, "block_serial_number": 318777396679687, "timestamp": "2021-09-20T12:17:50.999997+00:00", "f_adc": 200, "data_id": {"signal_input_index": 131, "_raw": 131}, "integration_interval_raw": 195311, "integration_interval": 0.99999232, "nof_signal_inputs": 1, "nof_bytes_per_statistic": 8, "nof_statistics_per_packet": 512, "payload": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]}
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diff --git a/tests/aggregator/test_bst_aggregator.py b/tests/aggregator/test_bst_aggregator.py
index 3602a3fd9719c91c5e6dff4254bd27696f32a055..9e22043bd7bd09902b2aca88436bb941524aa406 100644
--- a/tests/aggregator/test_bst_aggregator.py
+++ b/tests/aggregator/test_bst_aggregator.py
@@ -6,7 +6,9 @@ import json
from os.path import dirname
from unittest import TestCase
-from lofar_station_client.statistics.statistics_data import StatisticsDataFile
+import numpy
+
+from lofar_station_client.dts.constants import N_pol
from lofar_stingray.aggregator import BstAggregator
@@ -14,44 +16,34 @@ from lofar_stingray.aggregator import BstAggregator
class TestBstAggregator(TestCase):
"""Test cases of the BstAggregator class"""
- def test_mode(self):
- """Test mode property"""
- metadata_packets = []
+ def test_packets_to_matrix(self):
+ """Test packets_to_matrix method"""
packets = []
- sut = BstAggregator("test", "hba", metadata_packets, packets)
- assert sut.mode == "BST"
- def test_convert(self):
- """Test convert method"""
- metadata_packets = []
- packets = []
+ # load packets for one timestamp
with open(dirname(__file__) + "/bst.json", encoding="utf-8") as f:
for line in f:
- packets.append(json.loads(line))
- sut = BstAggregator("test-001", "hba0", metadata_packets, packets)
+ packet = json.loads(line)
+ packet["payload"] = numpy.array(packet["payload"], dtype=numpy.float32)
+ packets.append(packet)
- statistics = StatisticsDataFile()
- sut.convert(statistics)
+ sut = BstAggregator()
+ matrix = sut.packets_to_matrix(packets)
- assert list(statistics.keys()) == [
- "BST_2022-05-20T11:08:45.000",
- "BST_2022-05-20T11:08:46.000",
- "BST_2022-05-20T11:08:47.000",
- "BST_2022-05-20T11:08:48.000",
- ]
+ numpy.testing.assert_array_equal(
+ matrix, numpy.ones((BstAggregator.MAX_BEAMLETS, N_pol), dtype=numpy.float32)
+ )
- def test_convert_exceed_beamlets(self):
- """Test convert method"""
- metadata_packets = []
+ def test_exceed_beamlets(self):
+ """Test packets_to_matrix method"""
packets = [
{
"source_info": {"payload_error": False},
"data_id": {"beamlet_index": 487},
- "payload": [0, 0, 0],
+ "payload": numpy.array([0, 0, 0], dtype=numpy.float32),
}
]
- sut = BstAggregator("test-001", "hba0", metadata_packets, packets)
+ sut = BstAggregator()
- statistics = StatisticsDataFile()
with self.assertRaises(ValueError):
- sut.convert(statistics)
+ _ = sut.packets_to_matrix(packets)
diff --git a/tests/aggregator/test_collect.py b/tests/aggregator/test_collect.py
new file mode 100644
index 0000000000000000000000000000000000000000..258b71fea9e993aa117b410332d1d668801491b7
--- /dev/null
+++ b/tests/aggregator/test_collect.py
@@ -0,0 +1,47 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" CollectPacketsPerTimestamp tests """
+from datetime import datetime
+from unittest import TestCase
+
+from lofar_stingray.aggregator import CollectPacketsPerTimestamp
+
+# pylint: disable=too-few-public-methods
+
+
+class TestCollectPacketsPerTimestamp(TestCase):
+ """Test cases of the CollectPacketsPerTimestamp class"""
+
+ class FakeStatisticsPacket:
+ """A mock for a StatisticsPacket"""
+
+ def __init__(self, timestamp):
+ self.timestamp = timestamp
+
+ def __repr__(self):
+ return f"FakeStatisticsPacket({self.timestamp})"
+
+ def test_grouping(self):
+ """Test whether packets get grouped per timestamp."""
+
+ timestamps = [
+ datetime(2024, 11, 1),
+ datetime(2024, 11, 1),
+ datetime(2024, 11, 1),
+ datetime(2024, 11, 2),
+ datetime(2024, 11, 2),
+ datetime(2024, 11, 3),
+ ]
+
+ packets = [self.FakeStatisticsPacket(ts) for ts in timestamps]
+
+ sut = CollectPacketsPerTimestamp()
+ groups = [
+ group for packet in packets for group in sut.put_packet(packet)
+ ] + list(sut.done())
+
+ self.assertEqual(3, len(groups))
+ self.assertEqual({datetime(2024, 11, 1)}, {p.timestamp for p in groups[0]})
+ self.assertEqual({datetime(2024, 11, 2)}, {p.timestamp for p in groups[1]})
+ self.assertEqual({datetime(2024, 11, 3)}, {p.timestamp for p in groups[2]})
diff --git a/tests/aggregator/test_sst_aggregator.py b/tests/aggregator/test_sst_aggregator.py
index e1cee854fd15060bd3f90f7f29113fec5d22359c..2ed0a85ee948858e859b76596b1559463c0bf1fa 100644
--- a/tests/aggregator/test_sst_aggregator.py
+++ b/tests/aggregator/test_sst_aggregator.py
@@ -7,7 +7,6 @@ from os.path import dirname
from unittest import TestCase
import numpy
-from lofar_station_client.statistics.statistics_data import StatisticsDataFile
from lofar_stingray.aggregator import SstAggregator
@@ -15,74 +14,48 @@ from lofar_stingray.aggregator import SstAggregator
class TestSstAggregator(TestCase):
"""Test cases of the SstAggregator class"""
- def test_mode(self):
- """Test mode property"""
- metadata_packets = []
+ def test_packets_to_matrix(self):
+ """Test packets_to_matrix method"""
packets = []
- sut = SstAggregator("test", "hba", metadata_packets, packets)
- assert sut.mode == "SST"
- def test_convert(self):
- """Test convert method"""
- metadata_packets = []
- packets = []
+ # load packets for one timestamp
with open(dirname(__file__) + "/sst.json", encoding="utf-8") as f:
for line in f:
- packets.append(json.loads(line))
- sut = SstAggregator("test-001", "lba", metadata_packets, packets)
+ packet = json.loads(line)
+ packet["payload"] = numpy.array(packet["payload"], dtype=numpy.float32)
+ packets.append(packet)
- statistics = StatisticsDataFile()
- sut.convert(statistics)
+ sut = SstAggregator()
+ matrix = sut.packets_to_matrix(packets)
- assert list(statistics.keys()) == [
- "SST_2021-09-20T12:17:40.000",
- "SST_2021-09-20T12:17:41.000",
- "SST_2021-09-20T12:17:42.000",
- "SST_2021-09-20T12:17:43.000",
- "SST_2021-09-20T12:17:44.000",
- "SST_2021-09-20T12:17:45.000",
- "SST_2021-09-20T12:17:46.000",
- "SST_2021-09-20T12:17:47.000",
- "SST_2021-09-20T12:17:48.000",
- "SST_2021-09-20T12:17:49.000",
- "SST_2021-09-20T12:17:50.000",
- "SST_2021-09-20T12:17:51.000",
- ]
numpy.testing.assert_array_equal(
- statistics["SST_2021-09-20T12:17:41.000"][120][:5],
+ matrix[120][:5],
numpy.array([118174500342, 4248876, 679874756, 2671774, 2472221]).astype(
numpy.float32
),
)
numpy.testing.assert_array_equal(
- statistics["SST_2021-09-20T12:17:41.000"][120][507:512],
+ matrix[120][507:512],
numpy.array([5534594, 5535017, 5519003, 128035163225, 5514898]).astype(
numpy.float32
),
)
- def test_convert_exceed_input_index(self):
- """Test convert method"""
- metadata_packets = []
+ def test_exceed_input_index(self):
+ """Test packets_to_matrix method"""
packets = [
{
"source_info": {"payload_error": False},
"data_id": {"signal_input_index": 0},
- "payload": [0, 0, 0],
+ "payload": numpy.array([0, 0, 0], dtype=numpy.float32),
}
]
- sut = SstAggregator(
- "test-001", "hba0", metadata_packets, packets, first_signal_input_index=1
- )
+ sut = SstAggregator(first_signal_input_index=1)
- statistics = StatisticsDataFile()
with self.assertRaises(ValueError):
- sut.convert(statistics)
+ _ = sut.packets_to_matrix(packets)
- sut = SstAggregator(
- "test-001", "hba0", metadata_packets, packets, nr_signal_inputs=0
- )
+ sut = SstAggregator(nr_signal_inputs=0)
- statistics = StatisticsDataFile()
with self.assertRaises(ValueError):
- sut.convert(statistics)
+ _ = sut.packets_to_matrix(packets)
diff --git a/tests/aggregator/test_xst_aggregator.py b/tests/aggregator/test_xst_aggregator.py
index bba9627ea3db25f77a9f4be5e1f52e5c92de3ca9..847ef4f68a9237b5bdd5bc0ac7159bd567d40279 100644
--- a/tests/aggregator/test_xst_aggregator.py
+++ b/tests/aggregator/test_xst_aggregator.py
@@ -7,7 +7,6 @@ from os.path import dirname
from unittest import TestCase
import numpy
-from lofar_station_client.statistics.statistics_data import StatisticsDataFile
from lofar_stingray.aggregator import XstAggregator
@@ -15,41 +14,24 @@ from lofar_stingray.aggregator import XstAggregator
class TestXstAggregator(TestCase):
"""Test cases of the XstAggregator class"""
- def test_mode(self):
- """Test mode property"""
- metadata_packets = []
+ def test_packets_to_matrix(self):
+ """Test packets_to_matrix method"""
packets = []
- sut = XstAggregator("test", "hba", metadata_packets, packets)
- assert sut.mode == "XST"
- def test_convert(self):
- """Test convert method"""
- metadata_packets = []
- with open(dirname(__file__) + "/metadata.json", encoding="utf-8") as f:
- for line in f:
- metadata_packets.append(json.loads(line))
- packets = []
+ # load packets for one timestamp
with open(dirname(__file__) + "/xst.json", encoding="utf-8") as f:
for line in f:
- packets.append(json.loads(line))
- sut = XstAggregator("test-001", "lba", metadata_packets, packets)
-
- statistics = StatisticsDataFile()
- sut.convert(statistics)
-
- assert list(statistics.keys()) == [
- "XST_2021-09-13T13:21:32.000",
- "XST_2021-09-13T13:21:33.000",
- "XST_2021-09-13T13:21:34.000",
- "XST_2021-09-13T13:21:35.000",
- "XST_2021-09-13T13:21:36.000",
- "XST_2021-09-13T13:21:37.000",
- "XST_2021-09-13T13:21:38.000",
- ]
- assert statistics["XST_2021-09-13T13:21:32.000"]["subband"][0] == 102
- assert statistics["XST_2021-09-13T13:21:32.000"]["frequency"][0] == 19921876
+ packet = json.loads(line)
+ packet["payload"] = numpy.array(packet["payload"], dtype=numpy.float32)
+ packets.append(packet)
+
+ sut = XstAggregator()
+ matrix = sut.packets_to_matrix(packets)
+
+ self.assertEqual(102, matrix[0][0])
+
numpy.testing.assert_array_equal(
- statistics["XST_2021-09-13T13:21:32.000"]["data"][0][0][0:3],
+ matrix[0][1][0][0:3],
numpy.array(
[
1.2392113e10 + 0.000000e00j,
@@ -62,61 +44,47 @@ class TestXstAggregator(TestCase):
def test_convert_exceed_input_index(self):
"""Test convert method"""
- metadata_packets = []
packets = [
{
"source_info": {"payload_error": False},
"data_id": {"first_baseline": 0},
"nof_signal_inputs": 99,
- "payload": [0, 0, 0],
+ "payload": numpy.array([0, 0, 0], dtype=numpy.float32),
}
]
- sut = XstAggregator(
- "test-001", "hba0", metadata_packets, packets, first_signal_input_index=0
- )
+ sut = XstAggregator(packets, first_signal_input_index=0)
- statistics = StatisticsDataFile()
with self.assertRaises(ValueError):
- sut.convert(statistics)
+ _ = sut.packets_to_matrix(packets)
packets = [
{
"source_info": {"payload_error": False},
"data_id": {"first_baseline": [0, 0]},
"nof_signal_inputs": 12,
- "payload": [0, 0, 0],
+ "payload": numpy.array([0, 0, 0], dtype=numpy.float32),
}
]
sut = XstAggregator(
- "test-001",
- "hba0",
- metadata_packets,
- packets,
first_signal_input_index=99,
nr_signal_inputs=0,
)
- statistics = StatisticsDataFile()
with self.assertRaises(ValueError):
- sut.convert(statistics)
+ _ = sut.packets_to_matrix(packets)
packets = [
{
"source_info": {"payload_error": False},
"data_id": {"first_baseline": [1, 0]},
"nof_signal_inputs": 12,
- "payload": [0, 0, 0],
+ "payload": numpy.array([0, 0, 0], dtype=numpy.float32),
}
]
sut = XstAggregator(
- "test-001",
- "hba0",
- metadata_packets,
- packets,
first_signal_input_index=0,
nr_signal_inputs=100,
)
- statistics = StatisticsDataFile()
with self.assertRaises(ValueError):
- sut.convert(statistics)
+ _ = sut.packets_to_matrix(packets)
diff --git a/tests/aggregator/xst.json b/tests/aggregator/xst.json
index d82cabe48996188016254456ca1e55d85a381e2f..fdb5fcf80b55eaf63af73ca15bce8f97447bbf19 100644
--- a/tests/aggregator/xst.json
+++ b/tests/aggregator/xst.json
@@ -1,14 +1 @@
{"marker": "X", "marker_raw": 88, "version_id": 5, "observation_id": 0, "station_id": 0, "station_info": {"_raw": 0, "station_id": 0, "antenna_field_index": 0}, "source_info": {"_raw": 4104, "antenna_band_index": 0, "nyquist_zone_index": 0, "t_adc": 1, "fsub_type": 0, "payload_error": false, "beam_repositioning_flag": false, "gn_index": 8, "subband_calibrated_flag": false}, "block_period_raw": 5120, "block_period": 5.12e-06, "block_serial_number": 318660017968750, "timestamp": "2021-09-13T13:21:32+00:00", "f_adc": 200, "data_id": {"subband_index": 102, "first_baseline": [0, 0], "_raw": 6684672}, "integration_interval_raw": 195312, "integration_interval": 0.99999744, "nof_signal_inputs": 12, "nof_bytes_per_statistic": 8, "nof_statistics_per_packet": 288, "payload": [12392113389, 0, 14179862119, 18838079865, 24097221288, 6114039749, -25342633, -70573295, 5006488, 20916709, 16929791, 3281090, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 14179862119, -18838079865, 46648201003, 0, 38074141365, -30600450043, -140919749, -43532845, 38310157, 16755435, 25327247, -22864647, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 24097221288, -6114039749, 38074141365, 30600450043, 51899830598, 0, -87234965, -128851147, 20376190, 39198341, 35897436, -1949609, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -25342633, 70573295, -140919749, 43532845, -87234965, 128851147, 6452839, 0, -141795, -17617, -65901, 96128, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5006488, -20916709, 38310157, -16755435, 20376190, -39198341, -141795, 17617, 2627149, 0, 13329, -1797, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 16929791, -3281090, 25327247, 22864647, 35897436, 1949609, -65901, -96128, 13329, 1797, 2688111, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]}
-{"marker": "X", "marker_raw": 88, "version_id": 5, "observation_id": 0, "station_id": 0, "station_info": {"_raw": 0, "station_id": 0, "antenna_field_index": 0}, "source_info": {"_raw": 4104, "antenna_band_index": 0, "nyquist_zone_index": 0, "t_adc": 1, "fsub_type": 0, "payload_error": false, "beam_repositioning_flag": false, "gn_index": 8, "subband_calibrated_flag": false}, "block_period_raw": 5120, "block_period": 5.12e-06, "block_serial_number": 318660018164062, "timestamp": "2021-09-13T13:21:32.999997+00:00", "f_adc": 200, "data_id": {"subband_index": 102, "first_baseline": [0, 0], "_raw": 6684672}, "integration_interval_raw": 195311, "integration_interval": 0.99999232, "nof_signal_inputs": 12, "nof_bytes_per_statistic": 8, "nof_statistics_per_packet": 288, "payload": [12413858683, 0, 14201791496, 18850074023, 24121283534, 6105956026, -25175879, -70735845, 4677411, 20810195, 17408925, 3164536, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 14201791496, -18850074023, 46652756066, 0, 38071415735, -30610981244, -140522709, -44089030, 37933020, 17519929, 25512090, -23520969, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 24121283534, -6105956026, 38071415735, 30610981244, 51896055953, 0, -86413577, -129205600, 19664327, 39418420, 36540176, -2575150, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -25175879, 70735845, -140522709, 44089030, -86413577, 129205600, 6463630, 0, -135804, -17799, -65384, 83262, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 4677411, -20810195, 37933020, -17519929, 19664327, -39418420, -135804, 17799, 2635435, 0, 10221, -7964, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 17408925, -3164536, 25512090, 23520969, 36540176, 2575150, -65384, -83262, 10221, 7964, 2686738, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]}
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-{"marker": "X", "marker_raw": 88, "version_id": 5, "observation_id": 0, "station_id": 0, "station_info": {"_raw": 0, "station_id": 0, "antenna_field_index": 0}, "source_info": {"_raw": 4104, "antenna_band_index": 0, "nyquist_zone_index": 0, "t_adc": 1, "fsub_type": 0, "payload_error": false, "beam_repositioning_flag": false, "gn_index": 8, "subband_calibrated_flag": false}, "block_period_raw": 5120, "block_period": 5.12e-06, "block_serial_number": 318660018359375, "timestamp": "2021-09-13T13:21:34+00:00", "f_adc": 200, "data_id": {"subband_index": 103, "first_baseline": [0, 0], "_raw": 6750208}, "integration_interval_raw": 195312, "integration_interval": 0.99999744, "nof_signal_inputs": 12, "nof_bytes_per_statistic": 8, "nof_statistics_per_packet": 288, "payload": [12385365087, 0, 14186946692, 18819584006, 24097302718, 6099039777, -24945512, -69913531, 4639753, 20894302, 17490046, 2741624, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 14186946692, -18819584006, 46629023161, 0, 38075766990, -30596299162, -139353746, -43388107, 38284085, 17419608, 24897986, -24206447, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 24097302718, -6099039777, 38075766990, 30596299162, 51911961307, 0, -85709728, -127795221, 19962313, 39661386, 36485882, -3431155, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -24945512, 69913531, -139353746, 43388107, -85709728, 127795221, 6424072, 0, -140436, -13018, -71076, 101500, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 4639753, -20894302, 38284085, -17419608, 19962313, -39661386, -140436, 13018, 2606986, 0, 11955, 611, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 17490046, -2741624, 24897986, 24206447, 36485882, 3431155, -71076, -101500, 11955, -611, 2694668, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]}
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-{"marker": "X", "marker_raw": 88, "version_id": 5, "observation_id": 0, "station_id": 0, "station_info": {"_raw": 0, "station_id": 0, "antenna_field_index": 0}, "source_info": {"_raw": 4104, "antenna_band_index": 0, "nyquist_zone_index": 0, "t_adc": 1, "fsub_type": 0, "payload_error": false, "beam_repositioning_flag": false, "gn_index": 8, "subband_calibrated_flag": false}, "block_period_raw": 5120, "block_period": 5.12e-06, "block_serial_number": 318660018750000, "timestamp": "2021-09-13T13:21:36+00:00", "f_adc": 200, "data_id": {"subband_index": 103, "first_baseline": [0, 0], "_raw": 6750208}, "integration_interval_raw": 195312, "integration_interval": 0.99999744, "nof_signal_inputs": 12, "nof_bytes_per_statistic": 8, "nof_statistics_per_packet": 288, "payload": [12355074767, 0, 14175901542, 18811206276, 24076086587, 6086801692, -24306543, -70376209, 4374428, 20629065, 17368710, 3444310, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 14175901542, -18811206276, 46690811495, 0, 38097675610, -30641929713, -139743704, -44806879, 37701106, 17390617, 25892101, -23470708, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 24076086587, -6086801692, 38097675610, 30641929713, 51945344237, 0, -85031567, -129242928, 19543069, 39274020, 36781596, -2213639, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -24306543, 70376209, -139743704, 44806879, -85031567, 129242928, 6453886, 0, -138401, -22567, -68105, 91684, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 4374428, -20629065, 37701106, -17390617, 19543069, -39274020, -138401, 22567, 2601114, 0, 17453, -3483, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 17368710, -3444310, 25892101, 23470708, 36781596, 2213639, -68105, -91684, 17453, 3483, 2693233, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]}
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diff --git a/tests/annotator/__init__.py b/tests/annotator/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..736b85bf38a55648a464449d2b90651475c5f4ba
--- /dev/null
+++ b/tests/annotator/__init__.py
@@ -0,0 +1,4 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Aggregator module tests """
diff --git a/tests/aggregator/metadata.json b/tests/annotator/metadata.json
similarity index 100%
rename from tests/aggregator/metadata.json
rename to tests/annotator/metadata.json
diff --git a/tests/aggregator/test_base_aggregator.py b/tests/annotator/test_base_annotator.py
similarity index 92%
rename from tests/aggregator/test_base_aggregator.py
rename to tests/annotator/test_base_annotator.py
index e5ae481e24ac13f8bec904a64ae4a777d12e6d54..83df8a5db52890428be5ea9f6bc9d9a78ae2ad11 100644
--- a/tests/aggregator/test_base_aggregator.py
+++ b/tests/annotator/test_base_annotator.py
@@ -1,7 +1,7 @@
# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
# SPDX-License-Identifier: Apache-2.0
-""" BaseAggregator tests """
+""" BaseAnnotator tests """
import json
from datetime import datetime
from os.path import dirname
@@ -9,42 +9,44 @@ from unittest import TestCase
from lofar_station_client.statistics.statistics_data import StatisticsDataFile
-from lofar_stingray.aggregator._base import BaseAggregator
+from lofar_stingray.annotator._base import BaseAnnotator
-class _TestAggregator(BaseAggregator):
+class _TestAnnotator(BaseAnnotator):
@property
def mode(self):
return "TEST"
- def convert(self, statistics: StatisticsDataFile):
+ def write(self, statistics: StatisticsDataFile):
"""Not used in unit tests"""
+ raise NotImplementedError
-class TestBaseAggregator(TestCase):
- """Test cases of the BaseAggregator class"""
+
+class TestBaseAnnotator(TestCase):
+ """Test cases of the BaseAnnotator class"""
def test_format_timestamp(self):
"""Test format_timestamp method"""
ts = datetime.fromisoformat("2024-06-07T13:21:32+00:00")
- formatted = BaseAggregator.format_timestamp(ts)
+ formatted = BaseAnnotator.format_timestamp(ts)
assert formatted == "2024-06-07T13:21:32.000"
def test_round_datetime_ms(self):
"""Test round_datetime_ms method"""
ts = datetime.fromisoformat("2024-06-05 13:21:32.000003+00:00")
- rounded = BaseAggregator.round_datetime_ms(ts)
+ rounded = BaseAnnotator.round_datetime_ms(ts)
assert rounded == datetime.fromisoformat("2024-06-05T13:21:32+00:00")
ts = datetime.fromisoformat("2021-09-13 13:21:32.999997+00:00")
- rounded = BaseAggregator.round_datetime_ms(ts)
+ rounded = BaseAnnotator.round_datetime_ms(ts)
assert rounded == datetime.fromisoformat("2021-09-13 13:21:33+00:00")
def test_mode(self):
"""Test mode property"""
metadata_packets = []
- sut = _TestAggregator("test", "hba", metadata_packets)
+ sut = _TestAnnotator("test", "hba", metadata_packets)
assert sut.mode == "TEST"
def test_set_file_header(self):
@@ -53,7 +55,7 @@ class TestBaseAggregator(TestCase):
with open(dirname(__file__) + "/metadata.json", encoding="utf-8") as f:
for line in f:
metadata_packets.append(json.loads(line))
- sut = _TestAggregator("test-001", "hba0", metadata_packets)
+ sut = _TestAnnotator("test-001", "hba0", metadata_packets)
statistics = StatisticsDataFile()
sut.set_file_header(statistics)
diff --git a/tests/annotator/test_bst_annotator.py b/tests/annotator/test_bst_annotator.py
new file mode 100644
index 0000000000000000000000000000000000000000..7f62c6c03b74109b07756cfd085dab2416efea5d
--- /dev/null
+++ b/tests/annotator/test_bst_annotator.py
@@ -0,0 +1,48 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" BstAnnotator tests """
+from unittest import TestCase
+
+import numpy
+
+from lofar_station_client.statistics.statistics_data import StatisticsDataFile
+
+from lofar_stingray.annotator import BstAnnotator
+
+
+class TestBstAnnotator(TestCase):
+ """Test cases of the BstAnnotator class"""
+
+ def test_mode(self):
+ """Test mode property"""
+ metadata_packets = []
+ matrices = []
+ sut = BstAnnotator("test", "hba", metadata_packets, matrices)
+ self.assertEqual("BST", sut.mode)
+
+ def test_write(self):
+ """Test write method"""
+ metadata_packets = []
+ matrices = [
+ {
+ "timestamp": "2022-05-20T11:08:45",
+ "bst_data": numpy.ones((488, 2)),
+ },
+ {
+ "timestamp": "2022-05-20T11:08:45.999997",
+ "bst_data": numpy.ones((488, 2)),
+ },
+ ]
+ sut = BstAnnotator("test-001", "hba0", metadata_packets, matrices)
+
+ statistics = StatisticsDataFile()
+ sut.write(statistics)
+
+ self.assertListEqual(
+ list(statistics.keys()),
+ [
+ "BST_2022-05-20T11:08:45.000",
+ "BST_2022-05-20T11:08:46.000",
+ ],
+ )
diff --git a/tests/annotator/test_sst_annotator.py b/tests/annotator/test_sst_annotator.py
new file mode 100644
index 0000000000000000000000000000000000000000..e49a78d460efed11be8206781adcfd7629251053
--- /dev/null
+++ b/tests/annotator/test_sst_annotator.py
@@ -0,0 +1,47 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" SstAnnotator tests """
+from unittest import TestCase
+
+import numpy
+from lofar_station_client.statistics.statistics_data import StatisticsDataFile
+
+from lofar_stingray.annotator import SstAnnotator
+
+
+class TestSstAnnotator(TestCase):
+ """Test cases of the SstAnnotator class"""
+
+ def test_mode(self):
+ """Test mode property"""
+ metadata_packets = []
+ matrices = []
+ sut = SstAnnotator("test", "hba", metadata_packets, matrices)
+ self.assertEqual("SST", sut.mode)
+
+ def test_write(self):
+ """Test write method"""
+ metadata_packets = []
+ matrices = [
+ {
+ "timestamp": "2022-05-20T11:08:45",
+ "sst_data": numpy.ones((512, 2)),
+ },
+ {
+ "timestamp": "2022-05-20T11:08:45.999997",
+ "sst_data": numpy.ones((512, 2)),
+ },
+ ]
+ sut = SstAnnotator("test-001", "hba0", metadata_packets, matrices)
+
+ statistics = StatisticsDataFile()
+ sut.write(statistics)
+
+ self.assertListEqual(
+ list(statistics.keys()),
+ [
+ "SST_2022-05-20T11:08:45.000",
+ "SST_2022-05-20T11:08:46.000",
+ ],
+ )
diff --git a/tests/annotator/test_xst_annotator.py b/tests/annotator/test_xst_annotator.py
new file mode 100644
index 0000000000000000000000000000000000000000..50d20fff228bd85eaf39c83b515af2a8e2bae74c
--- /dev/null
+++ b/tests/annotator/test_xst_annotator.py
@@ -0,0 +1,51 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" XstAnnotator tests """
+from unittest import TestCase
+
+import numpy
+from lofar_station_client.statistics.statistics_data import StatisticsDataFile
+
+from lofar_stingray.annotator import XstAnnotator
+
+
+class TestXstAnnotator(TestCase):
+ """Test cases of the XstAnnotator class"""
+
+ def test_mode(self):
+ """Test mode property"""
+ metadata_packets = []
+ matrices = []
+ sut = XstAnnotator("test", "hba", metadata_packets, matrices)
+ self.assertEqual("XST", sut.mode)
+
+ def test_write(self):
+ """Test write method"""
+ metadata_packets = []
+ matrices = [
+ {
+ "timestamp": "2022-05-20T11:08:45",
+ "subband": 1,
+ "xst_data_real": numpy.ones((488, 2)),
+ "xst_data_imag": numpy.ones((488, 2)),
+ },
+ {
+ "timestamp": "2022-05-20T11:08:45.999997",
+ "subband": 2,
+ "xst_data_real": numpy.ones((96, 96)),
+ "xst_data_imag": numpy.ones((96, 96)),
+ },
+ ]
+ sut = XstAnnotator("test-001", "hba0", metadata_packets, matrices)
+
+ statistics = StatisticsDataFile()
+ sut.write(statistics)
+
+ self.assertListEqual(
+ list(statistics.keys()),
+ [
+ "XST_2022-05-20T11:08:45.000_SB001",
+ "XST_2022-05-20T11:08:46.000_SB002",
+ ],
+ )
diff --git a/tests/publish/SDP_BST_statistics_packets.bin b/tests/publish/SDP_BST_statistics_packets.bin
new file mode 100644
index 0000000000000000000000000000000000000000..2f567d03f9d63f265b7781c90a265dc531e0b09c
Binary files /dev/null and b/tests/publish/SDP_BST_statistics_packets.bin differ
diff --git a/tests/publish/SDP_SST_statistics_packets.bin b/tests/publish/SDP_SST_statistics_packets.bin
new file mode 100644
index 0000000000000000000000000000000000000000..e94347b86a0a03b940eb84980ec8f6d3b6d4e2d7
Binary files /dev/null and b/tests/publish/SDP_SST_statistics_packets.bin differ
diff --git a/tests/publish/SDP_XST_statistics_packets.bin b/tests/publish/SDP_XST_statistics_packets.bin
new file mode 100644
index 0000000000000000000000000000000000000000..97c08e3bfb47bf56c30288b5e62cc60c7034b417
Binary files /dev/null and b/tests/publish/SDP_XST_statistics_packets.bin differ
diff --git a/tests/publish/test_publish.py b/tests/publish/test_publish.py
new file mode 100644
index 0000000000000000000000000000000000000000..99a356c689aa9e70aa16798d7283dcba53cd5f18
--- /dev/null
+++ b/tests/publish/test_publish.py
@@ -0,0 +1,191 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Testing of the publish program"""
+import json
+import numpy
+from os.path import dirname
+from unittest import TestCase
+from unittest.mock import patch
+
+from lofar_stingray import publish
+
+from prometheus_client.registry import REGISTRY
+
+
+class TestPublish(TestCase):
+ """Test cases of the publish program"""
+
+ def setUp(self):
+ super().setUp()
+
+ # Clear all metrics to make sure we don't register the same one twice
+ # between tests (the library forbids it).
+ #
+ # Unfortunately, Metrics draw copies of prometheus_client.registry.REGISTRY,
+ # and that does not provide a public interface to query the registered
+ # collectors.
+ for collector in list(REGISTRY._collector_to_names.keys()):
+ REGISTRY.unregister(collector)
+
+ @patch("lofar_stingray.publish.start_http_server", autospec=True)
+ @patch("lofar_stingray.publish.ZeroMQPublisher", autospec=True)
+ def test_bst(self, m_publisher, m_prometheus_server):
+ publish.main(
+ [
+ "cs001",
+ "lba",
+ "bst",
+ f"file:{dirname(__file__)}/SDP_BST_statistics_packets.bin",
+ ]
+ )
+ published_messages = [
+ call.args[0]
+ for call in m_publisher.return_value.__enter__.return_value.send.mock_calls
+ ]
+
+ # file contains four timestamps, so there should be four messages
+ self.assertEqual(4, len(published_messages))
+
+ # messages should be valid json
+ bst_messages = [json.loads(msg) for msg in published_messages]
+
+ # check fields
+ for idx, bst_message in enumerate(bst_messages):
+ self.assertEqual("cs001", bst_message["station"], f"{idx=}, {bst_message=}")
+ self.assertEqual(
+ "lba", bst_message["antenna_field"], f"{idx=}, {bst_message=}"
+ )
+ self.assertEqual("bst", bst_message["type"], f"{idx=}, {bst_message=}")
+ self.assertEqual(
+ (488, 2),
+ numpy.array(bst_message["bst_data"]).shape,
+ f"{idx=}, {bst_message=}",
+ )
+
+ # check timestamps
+ self.assertEqual(
+ "2022-05-20T11:08:44.999997+00:00", bst_messages[0]["timestamp"]
+ )
+ self.assertEqual("2022-05-20T11:08:46+00:00", bst_messages[1]["timestamp"])
+ self.assertEqual(
+ "2022-05-20T11:08:46.999997+00:00", bst_messages[2]["timestamp"]
+ )
+ self.assertEqual("2022-05-20T11:08:48+00:00", bst_messages[3]["timestamp"])
+
+ @patch("lofar_stingray.publish.start_http_server", autospec=True)
+ @patch("lofar_stingray.publish.ZeroMQPublisher", autospec=True)
+ def test_sst(self, m_publisher, m_prometheus_server):
+ publish.main(
+ [
+ "cs001",
+ "lba",
+ "sst",
+ f"file:{dirname(__file__)}/SDP_SST_statistics_packets.bin",
+ ]
+ )
+ published_messages = [
+ call.args[0]
+ for call in m_publisher.return_value.__enter__.return_value.send.mock_calls
+ ]
+
+ # file contains 12 timestamps, so there should be 12 messages
+ self.assertEqual(12, len(published_messages))
+
+ # messages should be valid json
+ sst_messages = [json.loads(msg) for msg in published_messages]
+
+ # check fields
+ for idx, sst_message in enumerate(sst_messages):
+ self.assertEqual("cs001", sst_message["station"], f"{idx=}, {sst_message=}")
+ self.assertEqual(
+ "lba", sst_message["antenna_field"], f"{idx=}, {sst_message=}"
+ )
+ self.assertEqual("sst", sst_message["type"], f"{idx=}, {sst_message=}")
+ self.assertEqual(
+ (192, 512),
+ numpy.array(sst_message["sst_data"]).shape,
+ f"{idx=}, {sst_message=}",
+ )
+
+ # check timestamps
+ self.assertEqual("2021-09-20T12:17:40+00:00", sst_messages[0]["timestamp"])
+ self.assertEqual(
+ "2021-09-20T12:17:40.999997+00:00", sst_messages[1]["timestamp"]
+ )
+ self.assertEqual("2021-09-20T12:17:42+00:00", sst_messages[2]["timestamp"])
+ self.assertEqual(
+ "2021-09-20T12:17:42.999997+00:00", sst_messages[3]["timestamp"]
+ )
+ self.assertEqual("2021-09-20T12:17:44+00:00", sst_messages[4]["timestamp"])
+ self.assertEqual(
+ "2021-09-20T12:17:44.999997+00:00", sst_messages[5]["timestamp"]
+ )
+ self.assertEqual("2021-09-20T12:17:46+00:00", sst_messages[6]["timestamp"])
+ self.assertEqual(
+ "2021-09-20T12:17:46.999997+00:00", sst_messages[7]["timestamp"]
+ )
+ self.assertEqual("2021-09-20T12:17:48+00:00", sst_messages[8]["timestamp"])
+ self.assertEqual(
+ "2021-09-20T12:17:48.999997+00:00", sst_messages[9]["timestamp"]
+ )
+ self.assertEqual("2021-09-20T12:17:50+00:00", sst_messages[10]["timestamp"])
+ self.assertEqual(
+ "2021-09-20T12:17:50.999997+00:00", sst_messages[11]["timestamp"]
+ )
+
+ @patch("lofar_stingray.publish.start_http_server", autospec=True)
+ @patch("lofar_stingray.publish.ZeroMQPublisher", autospec=True)
+ def test_xst(self, m_publisher, m_prometheus_server):
+ publish.main(
+ [
+ "cs001",
+ "lba",
+ "xst",
+ f"file:{dirname(__file__)}/SDP_XST_statistics_packets.bin",
+ ]
+ )
+ published_messages = [
+ call.args[0]
+ for call in m_publisher.return_value.__enter__.return_value.send.mock_calls
+ ]
+
+ # file contains 7 timestamps, so there should be 7 messages
+ self.assertEqual(7, len(published_messages))
+
+ # messages should be valid json
+ xst_messages = [json.loads(msg) for msg in published_messages]
+
+ # check fields
+ for idx, xst_message in enumerate(xst_messages):
+ self.assertEqual("cs001", xst_message["station"], f"{idx=}, {xst_message=}")
+ self.assertEqual(
+ "lba", xst_message["antenna_field"], f"{idx=}, {xst_message=}"
+ )
+ self.assertEqual("xst", xst_message["type"], f"{idx=}, {xst_message=}")
+ self.assertEqual(102, xst_message["subband"], f"{idx=}, {xst_message=}")
+ self.assertEqual(
+ (192, 192),
+ numpy.array(xst_message["xst_data_real"]).shape,
+ f"{idx=}, {xst_message=}",
+ )
+ self.assertEqual(
+ (192, 192),
+ numpy.array(xst_message["xst_data_imag"]).shape,
+ f"{idx=}, {xst_message=}",
+ )
+
+ # check timestamps
+ self.assertEqual("2021-09-13T13:21:32+00:00", xst_messages[0]["timestamp"])
+ self.assertEqual(
+ "2021-09-13T13:21:32.999997+00:00", xst_messages[1]["timestamp"]
+ )
+ self.assertEqual("2021-09-13T13:21:34+00:00", xst_messages[2]["timestamp"])
+ self.assertEqual(
+ "2021-09-13T13:21:34.999997+00:00", xst_messages[3]["timestamp"]
+ )
+ self.assertEqual("2021-09-13T13:21:36+00:00", xst_messages[4]["timestamp"])
+ self.assertEqual(
+ "2021-09-13T13:21:36.999997+00:00", xst_messages[5]["timestamp"]
+ )
+ self.assertEqual("2021-09-13T13:21:38+00:00", xst_messages[6]["timestamp"])
diff --git a/tests/reader/test_s3_packet_loader.py b/tests/reader/test_s3_packet_loader.py
index 3e856dcb26236679ea833991a514e20d1c0246de..81e3c9538877092e7ea656f5773e3feb0eb37a2a 100644
--- a/tests/reader/test_s3_packet_loader.py
+++ b/tests/reader/test_s3_packet_loader.py
@@ -105,7 +105,7 @@ class TestS3PacketLoader(TestCase):
result = packet_loader.wait_for_filenames_after(timestamp)
self.assertTrue(result) # objects were returned
- def test_load_packets(self):
+ def test_load_json(self):
"""Test if a numpy array is correctly serialized"""
start = datetime.fromisoformat("2024-06-07T13:21:32+00:00")
end = datetime.fromisoformat("2024-06-07T13:25:32+00:00")
@@ -124,7 +124,7 @@ class TestS3PacketLoader(TestCase):
packet_loader = S3PacketLoader("bucket", "prefix/", self.mock_minio)
returned_data = False
- for packet in packet_loader.load_packets(start, end, ts_field="ts"):
+ for packet in packet_loader.load_json(start, end, ts_field="ts"):
returned_data = True
self.assertNotEqual("ignored_packet", packet["info"])
self.assertIn(packet["info"], [str(x) for x in range(0, 5)])
diff --git a/tests/streams/__init__.py b/tests/streams/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..c92b615444d854a6e87370b16cf733a5859a07e7
--- /dev/null
+++ b/tests/streams/__init__.py
@@ -0,0 +1,2 @@
+# Copyright (C) 2023 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
diff --git a/tests/streams/test_create.py b/tests/streams/test_create.py
new file mode 100644
index 0000000000000000000000000000000000000000..0305aedf5b69e118dbbf397218c0cc3676b220ff
--- /dev/null
+++ b/tests/streams/test_create.py
@@ -0,0 +1,49 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Test streams/create """
+
+from unittest import TestCase
+
+from lofar_stingray.streams import (
+ create,
+ ZeroMQReceiver,
+ TCPStream,
+ UDPStream,
+ FileStream,
+)
+
+
+class TestCreate(TestCase):
+ """Test create, the Stream factory function."""
+
+ def test_tcp_listen(self):
+ """Test seting up a tcp stream to listen on."""
+ sut = create("tcp://localhost:9999")
+
+ self.assertIsInstance(sut, TCPStream)
+
+ def test_udp_listen(self):
+ """Test seting up a udp stream to listen on."""
+ sut = create("udp://localhost:9999")
+
+ self.assertIsInstance(sut, UDPStream)
+
+ def test_file_read(self):
+ """Test seting up a file to read from."""
+
+ # we don't actually open this file so it's
+ # ok to construct this
+ sut = create("file:///file")
+
+ self.assertIsInstance(sut, FileStream)
+
+ def test_zmq_subscribe(self):
+ """Test seting up a ZMQ connection to subscribe to"""
+ sut = create("zmq+tcp://localhost:9999/test2")
+ self.assertIsInstance(sut, ZeroMQReceiver)
+
+ def test_unknown(self):
+ """Test unsupported schemes."""
+ with self.assertRaises(ValueError):
+ create("example://localhost:8080")
diff --git a/tests/streams/test_zmq.py b/tests/streams/test_zmq.py
new file mode 100644
index 0000000000000000000000000000000000000000..7813ad70edeefbf5665a7638aa93e0048276a0eb
--- /dev/null
+++ b/tests/streams/test_zmq.py
@@ -0,0 +1,114 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+""" Test ZeroMQReceiver """
+
+from unittest import mock, TestCase
+
+import zmq
+
+from lofar_stingray.streams import ZeroMQReceiver
+
+
+@mock.patch("zmq.Context.instance")
+class TestZeroMQReceiver(TestCase):
+ """Test ZeroMQReceiver"""
+
+ def test_text(self, ctx):
+ """Test receiving messages encoded as text/plain."""
+
+ socket_mock = mock.Mock()
+ ctx.return_value = mock.Mock()
+ ctx.return_value.socket.return_value = socket_mock
+ socket_mock.recv_multipart.side_effect = [
+ ["test".encode(), "2024-05-17T08:35:48Z".encode(), "data1".encode()],
+ ["test".encode(), "2024-05-17T08:36:48Z".encode(), "data2".encode()],
+ zmq.ZMQError(errno=zmq.ETERM),
+ ]
+
+ receiver = ZeroMQReceiver(
+ "tcp://localhost:9999", ["test"], content_type="text/plain"
+ )
+
+ # on start, any subband should map on the first entry
+ self.assertListEqual(["test"], receiver.topics)
+ self.assertEqual("text/plain", receiver.content_type)
+
+ packages = []
+ for package in receiver:
+ packages.append(package)
+
+ self.assertListEqual(
+ ["data1", "data2"],
+ packages,
+ )
+
+ def test_json(self, ctx):
+ """Test receiving messages encoded as application/json."""
+
+ socket_mock = mock.Mock()
+ ctx.return_value = mock.Mock()
+ ctx.return_value.socket.return_value = socket_mock
+ socket_mock.recv_multipart.side_effect = [
+ [
+ "test2".encode(),
+ "2024-05-18T08:35:48".encode(),
+ '{"data": "one"}'.encode(),
+ ],
+ [
+ "test2".encode(),
+ "2024-05-18T08:36:48".encode(),
+ '{"data": "two"}'.encode(),
+ ],
+ zmq.ZMQError(errno=zmq.ETERM),
+ ]
+ receiver = ZeroMQReceiver(
+ "tcp://localhost:9999",
+ topics=["test2"],
+ content_type="application/json",
+ )
+ self.assertListEqual(["test2"], receiver.topics)
+ self.assertEqual("application/json", receiver.content_type)
+
+ packages = []
+ for package in receiver:
+ packages.append(package)
+
+ self.assertListEqual(
+ [
+ {"data": "one"},
+ {"data": "two"},
+ ],
+ packages,
+ )
+
+ def test_binary(self, ctx):
+ """Test receiving messages encoded as application/octet-stream."""
+
+ socket_mock = mock.Mock()
+ ctx.return_value = mock.Mock()
+ ctx.return_value.socket.return_value = socket_mock
+ socket_mock.recv_multipart.side_effect = [
+ ["test2".encode(), "2024-05-19T08:35:48".encode(), b"{data1}"],
+ ["test2".encode(), "2024-05-19T08:36:48".encode(), b"{data2}"],
+ zmq.ZMQError(errno=zmq.ETERM),
+ ]
+ receiver = ZeroMQReceiver(
+ "tcp://localhost:9999/",
+ topics=["test2"],
+ content_type="application/octet-stream",
+ )
+ self.assertListEqual(["test2"], receiver.topics)
+ self.assertEqual("application/octet-stream", receiver.content_type)
+
+ packages = []
+ for package in receiver:
+ packages.append(package)
+
+ self.assertListEqual(
+ [
+ b"{data1}",
+ b"{data2}",
+ ],
+ packages,
+ )
diff --git a/tests/test_forward.py b/tests/test_forward.py
new file mode 100644
index 0000000000000000000000000000000000000000..36c3f38ab1bd7a80ae40c28f3590d9b6784b4f00
--- /dev/null
+++ b/tests/test_forward.py
@@ -0,0 +1,76 @@
+# Copyright (C) 2024 ASTRON (Netherlands Institute for Radio Astronomy)
+# SPDX-License-Identifier: Apache-2.0
+
+"""Testing of the forward program"""
+import filecmp
+from os.path import dirname
+from unittest import TestCase
+from unittest.mock import patch
+from tempfile import TemporaryDirectory
+
+from prometheus_client.registry import REGISTRY
+
+from lofar_stingray import forward
+
+
+class TestForward(TestCase):
+ """Test cases of the forward program"""
+
+ def setUp(self):
+ super().setUp()
+
+ # Clear all metrics to make sure we don't register the same one twice
+ # between tests (the library forbids it).
+ #
+ # Unfortunately, Metrics draw copies of prometheus_client.registry.REGISTRY,
+ # and that does not provide a public interface to query the registered
+ # collectors.
+
+ # pylint: disable=protected-access
+ for collector in list(REGISTRY._collector_to_names.keys()):
+ REGISTRY.unregister(collector)
+
+ @patch("lofar_stingray.forward.start_http_server", autospec=True)
+ @patch("lofar_stingray.streams._create.ZeroMQReceiver", autospec=True)
+ def test_json_zmq_to_file(self, m_receiver, _m_prometheus_server):
+ """Test forwarding packets from ZMQ to file."""
+
+ m_receiver.return_value.__enter__.return_value.get_json.side_effect = [
+ {"a": "foo"},
+ {"b": "bar"},
+ None,
+ ]
+
+ with TemporaryDirectory() as tmpdir:
+ forward.main(
+ [
+ "zmq+tcp://localhost:6001/topic",
+ f"file:{tmpdir}/output.json",
+ "--datatype=json",
+ ]
+ )
+
+ with open(f"{tmpdir}/output.json", encoding="utf-8") as f:
+ lines = [line.rstrip() for line in f]
+
+ self.assertEqual('{"a": "foo"}', lines[0])
+ self.assertEqual('{"b": "bar"}', lines[1])
+
+ @patch("lofar_stingray.forward.start_http_server", autospec=True)
+ def test_packet_file_to_file(self, _m_prometheus_server):
+ """Test forwarding packets from file to file."""
+
+ with TemporaryDirectory() as tmpdir:
+
+ input_file = f"{dirname(__file__)}/publish/SDP_BST_statistics_packets.bin"
+ output_file = f"{tmpdir}/output.bin"
+ forward.main(
+ [
+ f"file:{input_file}",
+ f"file:{output_file}",
+ "--datatype=packet",
+ ]
+ )
+
+ # files must be identical after forwarding
+ self.assertTrue(filecmp.cmp(input_file, output_file))
diff --git a/tests/xst-packets.bin b/tests/xst-packets.bin
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index 0000000000000000000000000000000000000000..ef98c894ba5961573837624377b14695b1dd9263
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