diff --git a/steps/compress.cwl b/steps/compress.cwl index 4bb33781abc4baa031a73289db31f6b718589e84..07d07219e43a20e5956820e246470f30f3f33623 100644 --- a/steps/compress.cwl +++ b/steps/compress.cwl @@ -5,8 +5,6 @@ cwlVersion: v1.0 inputs: - id: directory type: Directory - inputBinding: - position: 0 outputs: - id: compressed @@ -18,11 +16,12 @@ baseCommand: - 'tar.sh' doc: 'Untar a compressed file' requirements: +# InlineJavascriptRequirement: {} InitialWorkDirRequirement: listing: - entryname: 'tar.sh' entry: | #!/bin/bash mkdir out - dir_name=\$(basename $1) - tar -cvf out/${dir_name}.tar.gz $1 + tar -cvf out/$(inputs.directory.basename).tar.gz $(inputs.directory.path) +