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EOSC
SolarImaging
Commits
d607e75e
Commit
d607e75e
authored
5 years ago
by
Mattia Mancini
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workflow/solarimaging.cwl
+83
-29
83 additions, 29 deletions
workflow/solarimaging.cwl
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29 deletions
workflow/solarimaging.cwl
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29
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d607e75e
...
@@ -7,19 +7,32 @@ $namespaces:
...
@@ -7,19 +7,32 @@ $namespaces:
inputs:
inputs:
- id: calibrator
- id: calibrator
type: 'Directory[]'
type: 'Directory[]'
'sbg:x': -4
08
'sbg:x': -4
98.1015319824219
'sbg:y':
-48
'sbg:y':
156.31472778320312
- id: sun
- id: sun
type: 'Directory[]'
type: 'Directory[]'
'sbg:x': -432.8020324707031
'sbg:x': -512.3553466796875
'sbg:y': 260.9136962890625
'sbg:y': 425.75128173828125
- id: sky_model
'sbg:x': -490.72222900390625
'sbg:y': 17.29166603088379
- id: sources
type: 'string[]'
'sbg:x': -511.42132568359375
'sbg:y': 304.5245056152344
outputs:
outputs:
- id: outh5parm
- id: image
outputSource:
- wsclean/image
type: File
'sbg:x': 1132.7830810546875
'sbg:y': 81.57866668701172
- id: dirty_image
outputSource:
outputSource:
-
h5parm_collector/outh5parm
-
wsclean/dirty_image
type: File
type: File
'sbg:x':
671
'sbg:x':
1145.4735107421875
'sbg:y':
55
'sbg:y':
294.7766418457031
steps:
steps:
- id: dp3_execute
- id: dp3_execute
in:
in:
...
@@ -30,6 +43,8 @@ steps:
...
@@ -30,6 +43,8 @@ steps:
- id: steps
- id: steps
source:
source:
- flagedge_calibrator/augmented_steps
- flagedge_calibrator/augmented_steps
- id: autoweight
default: true
out:
out:
- id: secondary_output_files
- id: secondary_output_files
- id: secondary_output_directories
- id: secondary_output_directories
...
@@ -47,24 +62,15 @@ steps:
...
@@ -47,24 +62,15 @@ steps:
run: ../lofar-cwl/steps/DP3.PreflaggerStepGenerator.cwl
run: ../lofar-cwl/steps/DP3.PreflaggerStepGenerator.cwl
'sbg:x': -330
'sbg:x': -330
'sbg:y': -244
'sbg:y': -244
- id: ddecal
in:
- id: msin
source: predict/msout
out:
- id: msout
- id: h5parm
run: ../lofar-cwl/steps/ddecal.cwl
scatter:
- msin
'sbg:x': 312
'sbg:y': -82
- id: predict
- id: predict
in:
in:
- id: msin
- id: msin
source: dp3_execute/msout
source: dp3_execute/msout
- id: sources_db
- id: sources_db
source: make_sourcedb/sourcedb
source: make_sourcedb/sourcedb
- id: sources
source:
- sources
out:
out:
- id: msout
- id: msout
run: ../lofar-cwl/steps/predict.cwl
run: ../lofar-cwl/steps/predict.cwl
...
@@ -76,30 +82,32 @@ steps:
...
@@ -76,30 +82,32 @@ steps:
in:
in:
- id: h5parmFiles
- id: h5parmFiles
source:
source:
-
dde
cal/h5parm
-
gain
cal/h5parm
out:
out:
- id: outh5parm
- id: outh5parm
- id: log
- id: log
run: ../lofar-cwl/steps/H5ParmCollector.cwl
run: ../lofar-cwl/steps/H5ParmCollector.cwl
label: H5parm_collector
label: H5parm_collector
'sbg:x': 4
62
'sbg:x': 4
33
'sbg:y': -50
'sbg:y': -50
- id: make_sourcedb
- id: make_sourcedb
in: []
in:
- id: sky_model
source: sky_model
out:
out:
- id: sourcedb
- id: sourcedb
- id: log
- id: log
run: ../lofar-cwl/steps/makesourcedb.cwl
run: ../lofar-cwl/steps/makesourcedb.cwl
label: make_sourcedb_ateam
label: make_sourcedb_ateam
'sbg:x': -
7
4
'sbg:x': -
15.8888893127441
4
'sbg:y': -
304
'sbg:y': -
298.60888671875
- id: flagedge_sun
- id: flagedge_sun
in: []
in: []
out:
out:
- id: augmented_steps
- id: augmented_steps
run: ../lofar-cwl/steps/DP3.PreflaggerStepGenerator.cwl
run: ../lofar-cwl/steps/DP3.PreflaggerStepGenerator.cwl
'sbg:x': -
332.9187927246094
'sbg:x': -
13.472081184387207
'sbg:y': 1
09.5025405883789
'sbg:y': 1
11.53807067871094
- id: dp3_execute_1
- id: dp3_execute_1
in:
in:
- id: msin
- id: msin
...
@@ -107,6 +115,8 @@ steps:
...
@@ -107,6 +115,8 @@ steps:
- id: steps
- id: steps
source:
source:
- flagedge_sun/augmented_steps
- flagedge_sun/augmented_steps
- id: autoweight
default: true
out:
out:
- id: secondary_output_files
- id: secondary_output_files
- id: secondary_output_directories
- id: secondary_output_directories
...
@@ -115,8 +125,52 @@ steps:
...
@@ -115,8 +125,52 @@ steps:
label: DP3.Execute
label: DP3.Execute
scatter:
scatter:
- msin
- msin
'sbg:x': -141.4873046875
'sbg:x': 449.2081298828125
'sbg:y': 231.12689208984375
'sbg:y': 190.84771728515625
- id: applycal
in:
- id: msin
source: dp3_execute_1/msout
- id: parmdb
source: h5parm_collector/outh5parm
out:
- id: msout
run: ../../lofar-cwl/steps/applycal.cwl
'sbg:x': 721.1517333984375
'sbg:y': 176.82852172851562
- id: gaincal
in:
- id: msin
source: predict/msout
- id: caltype
default: diagonal
- id: sourcedb
source: make_sourcedb/sourcedb
- id: usebeammodel
default: true
- id: solint
default: 4
- id: onebeamperpatch
default: true
out:
- id: msout
- id: h5parm
run: ../../lofar-cwl/steps/gaincal.cwl
scatter:
- msin
'sbg:x': 299
'sbg:y': -102
- id: wsclean
in:
- id: msin
source: applycal/msout
out:
- id: dirty_image
- id: image
run: ../../lofar-cwl/steps/wsclean.cwl
label: WSClean
'sbg:x': 976.1167602539062
'sbg:y': 188.5736083984375
requirements:
requirements:
- class: SubworkflowFeatureRequirement
- class: SubworkflowFeatureRequirement
- class: ScatterFeatureRequirement
- class: ScatterFeatureRequirement
...
...
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