diff --git a/steps/wsclean.cwl b/steps/wsclean.cwl index b1ab1734c56bf7af9f1efb30a6a94c9e77dd3ad4..94882771de10a1388bfe5e4b22e5ea77419676d7 100644 --- a/steps/wsclean.cwl +++ b/steps/wsclean.cwl @@ -27,6 +27,104 @@ inputs: type: Directory inputBinding: position: 2 + - id: no_reorder + type: boolean? + default: false + inputBinding: + prefix: -no-reorder + - id: no_update + type: boolean? + default: false + inputBinding: + prefix: -no-update-model + - id: mgain + type: float? + inputBinding: + prefix: -mgain + doc: | + Set the major iteration gain: during every major iteration, + the peak is reduced by the given factor. + With an mgain of 0.8, the peak is reduced by 80%. + This is quite a common and safe option for cleaning. + With a reasonable good PSF, 0.9 is accettable choice without losing + accuracy but speeding up the computation. With a very bad PSF, + it might be necessary to lower the mgain parameter. + - id: mem + type: int? + inputBinding: + prefix: -mem + doc: | + Limit memory usage to the given fraction of the total system memory. This is an approximate value. + - id: n_threads + type: int? + inputBinding: + prefix: -j + doc: | + Specify number of computing threads to use, i.e., number of cpu cores that will be used. + - id: no-update-model-required + type: boolean? + doc: + Do not require the update of the data column after imaging + inputBinding: + prefix: -no-update-model-required + - id: weight + type: string? + inputBinding: + prefix: -weight + doc: | + Weightmode can be: natural, uniform, briggs. Default: uniform. When using Briggs' weighting, + add the robustness parameter, like: briggs 0.5. + - id: pol + type: string? + inputBinding: + prefix: -pol + doc: | + Default: \'I\'. Possible values: XX, XY, YX, YY, I, Q, U, V, RR, RL, LR or LL (case insensitive). + It is allowed but not necessary to separate with commas, e.g.: 'xx,xy,yx,yy'. + Two or four polarizations can be joinedly cleaned (see '-joinpolarizations'), but + this is not the default. I, Q, U and V polarizations will be directly calculated from + the visibilities, which might require correction to get to real IQUV values. The + 'xy' polarization will output both a real and an imaginary image, which allows calculating + true Stokes polarizations for those telescopes. + - id: niter + type: integer? + inputBinding: + prefix: -niter + doc: | + Maximum number of clean iterations to perform. Default: 0 (=no cleaning) + - id: intervals-out + type: integer? + inputBinding: + prefix: -intervals-out + doc: | + Number of intervals to image inside the selected global interval. Default: 1 + - id: interval + type: integer[]? + inputBinding: + prefix: -interval + doc: | + Only image the given time interval. Indices specify the timesteps, end index is exclusive. + Default: image all time steps. + - id: multiscale + type: boolean? + inputBinding: + prefix: -multiscale + doc: | + Clean on different scales. This is a new algorithm. Default: off. + This parameter invokes the optimized multiscale algorithm published by Offringa & Smirnov (2017). + - id: auto-threshold + type: int? + inputBinding: + prefix: -auto-threshold + doc: | + Estimate noise level using a robust estimator and stop at sigma x stddev. + - id: auto-mask + type: int + inputBinding: + prefix: -auto-mask + doc: | + Construct a mask from found components and when a threshold of sigma is reached, continue + cleaning with the mask down to the normal threshold. outputs: dirty_image: type: File