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Commit e61ab801 authored by Marco Iacobelli's avatar Marco Iacobelli
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Update Dockerfile

parent fc25e389
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    ......@@ -20,13 +20,13 @@ RUN cd / && wget https://dl.bintray.com/boostorg/release/1.63.0/source/boost_1_6
    RUN cd / && mkdir -p /opt/lofarsoft/data && cd /opt/lofarsoft/data && wget ftp://anonymous@ftp.astron.nl/outgoing/Measures/WSRT_Measures.ztar && tar xvf WSRT_Measures.ztar && rm WSRT_Measures.ztar
    # install casacore v2.4.1
    RUN cd / && wget https://github.com/casacore/casacore/archive/v2.4.1.tar.gz && tar xvf v2.4.1.tar.gz && cd casacore-2.4.1 && mkdir build && cd build && cmake -DBUILD_PYTHON=True -DDATA_DIR=/opt/lofarsoft/data -DUSE_OPENMP=ON -DUSE_THREADS=OFF -DUSE_FFTW3=TRUE -DUSE_HDF5=ON -DCXX11=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft/ -DCMAKE_CXX_FLAGS="-fsigned-char -O2 -DNDEBUG -march=native" ../ && make -j4 && make install && cd ../../ && rm -rf casacore-2.4.1 v2.4.1.tar.gz
    RUN cd / && wget https://github.com/casacore/casacore/archive/v2.4.1.tar.gz && tar xvf v2.4.1.tar.gz && cd casacore-2.4.1 && mkdir build && cd build && cmake -DPORTABLE -DBUILD_PYTHON=True -DDATA_DIR=/opt/lofarsoft/data -DUSE_OPENMP=ON -DUSE_THREADS=OFF -DUSE_FFTW3=TRUE -DUSE_HDF5=ON -DCXX11=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft/ -DCMAKE_CXX_FLAGS="-fsigned-char -O2 -DNDEBUG -march=native" ../ && make -j4 && make install && cd ../../ && rm -rf casacore-2.4.1 v2.4.1.tar.gz
    # install python casacore v3.2.0
    RUN cd / && wget https://github.com/casacore/python-casacore/archive/v3.2.0.tar.gz && tar xvf v3.2.0.tar.gz && cd python-casacore-3.2.0 && python setup.py build_ext -I/opt/lofarsoft/include -L/opt/lofarsoft/lib/ && mkdir -p /opt/lofarsoft/lib/python2.7/site-packages/ && export PYTHONPATH=/opt/lofarsoft/lib/python2.7/site-packages/ && python setup.py install --prefix=/opt/lofarsoft && cd ../ && rm -rf v3.2.0.tar.gz
    # install AOFlagger 2.14 last py2 version compatible
    RUN cd / && wget https://sourceforge.net/projects/aoflagger/files/aoflagger-2.14.0/aoflagger-2.14.0.tar.bz2/download && mv download download.tar && tar xvf download.tar && cd aoflagger-2.14.0 && mkdir build && cd build && cmake ../ -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCMAKE_PREFIX_PATH=/opt/lofarsoft && make -j4 && make install && cd ../../ && rm -rf download.tar aoflagger-2.14.0
    RUN cd / && wget https://sourceforge.net/projects/aoflagger/files/aoflagger-2.14.0/aoflagger-2.14.0.tar.bz2/download && mv download download.tar && tar xvf download.tar && cd aoflagger-2.14.0 && mkdir build && cd build && cmake ../ -DPORTABLE -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCMAKE_PREFIX_PATH=/opt/lofarsoft && make -j4 && make install && cd ../../ && rm -rf download.tar aoflagger-2.14.0
    # install losoto 2.0
    RUN cd / && git clone https://github.com/revoltek/losoto.git && cd losoto && git checkout c8fbd6194074bef4009cb66dd7ecd59e98664d63 && export PYTHONPATH=/opt/lofarsoft/lib/python2.7/site-packages/ && pip install tables==3.5.2 && pip install configparser==4.0.2 && python setup.py install --prefix=/opt/lofarsoft && cd / && rm -rf losoto
    ......@@ -41,23 +41,23 @@ RUN cd / && git clone https://github.com/lofar-astron/PyBDSF.git && export PYTHO
    RUN cd / && git clone https://github.com/darafferty/LSMTool.git && cd LSMTool && git checkout v1.4.2 && export PYTHONPATH=/opt/lofarsoft/lib/python2.7/site-packages/ && python setup.py install --prefix=/opt/lofarsoft && cd / && rm -rf LSMTool
    # install the LOFAR beam library
    RUN cd / && git clone https://github.com/lofar-astron/LOFARBeam.git && cd LOFARBeam && mkdir build && cd build && cmake -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCMAKE_PREFIX_PATH=/opt/lofarsoft ../ && make && make install && cd ../../ && rm -rf LOFARBeam
    RUN cd / && git clone https://github.com/lofar-astron/LOFARBeam.git && cd LOFARBeam && mkdir build && cd build && cmake -DPORTABLE -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCMAKE_PREFIX_PATH=/opt/lofarsoft ../ && make && make install && cd ../../ && rm -rf LOFARBeam
    # install IDG 0.7
    RUN cd / && git clone https://gitlab.com/astron-idg/idg.git && cd idg && git checkout 0.7 && mkdir build && cd build && cmake -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft ../ && make && make install && cd / && rm -rf idg
    RUN cd / && git clone https://gitlab.com/astron-idg/idg.git && cd idg && git checkout 0.7 && mkdir build && cd build && cmake -DPORTABLE -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft ../ && make && make install && cd / && rm -rf idg
    # install WSClean v2.10.1
    RUN cd / && git clone https://gitlab.com/aroffringa/wsclean.git && cd wsclean && git checkout v2.10.1 && mkdir -p build && cd build && cmake -DCASACORE_ROOT_DIR=/opt/lofarsoft -DIDGAPI_LIBRARIES=/opt/lofarsoft/lib/libidg-api.so -DIDGAPI_INCLUDE_DIRS=/opt/lofarsoft/include -DCMAKE_PREFIX_PATH=/opt/lofarsoft -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft ../ && make -j 4 && make install
    RUN cd / && git clone https://gitlab.com/aroffringa/wsclean.git && cd wsclean && git checkout v2.10.1 && mkdir -p build && cd build && cmake -DPORTABLE -DCASACORE_ROOT_DIR=/opt/lofarsoft -DIDGAPI_LIBRARIES=/opt/lofarsoft/lib/libidg-api.so -DIDGAPI_INCLUDE_DIRS=/opt/lofarsoft/include -DCMAKE_PREFIX_PATH=/opt/lofarsoft -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft ../ && make -j 4 && make install
    # install Dysco v1.2
    RUN cd / && wget https://github.com/aroffringa/dysco/archive/v1.2.tar.gz && tar xvf v1.2.tar.gz && cd dysco-1.2 && mkdir build && cd build && cmake -DCASACORE_ROOT_DIR=/opt/lofarsoft -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft ../ && make -j 4 && make install && cd / && rm -rf v1.2.tar.gz dysco-1.2
    RUN cd / && wget https://github.com/aroffringa/dysco/archive/v1.2.tar.gz && tar xvf v1.2.tar.gz && cd dysco-1.2 && mkdir build && cd build && cmake -DPORTABLE -DCASACORE_ROOT_DIR=/opt/lofarsoft -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft ../ && make -j 4 && make install && cd / && rm -rf v1.2.tar.gz dysco-1.2
    # install DP3 v4.1 last py2 version compatible
    RUN cd / && git clone https://github.com/lofar-astron/DP3.git && cd DP3 && git checkout v4.1 && mkdir build && cd build && cmake -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCMAKE_PREFIX_PATH=/opt/lofarsoft ../ && make && make install && ln -s /opt/lofarsoft/bin/DPPP /opt/lofarsoft/bin/NDPPP && cd ../../ && rm -rf DP3
    # install LOFAR 3.2.1
    RUN cd / && svn --non-interactive -q co https://svn.astron.nl/LOFAR/branches/LOFAR-Release-3_2/ source
    RUN cd source && mkdir -p build/gnucxx11_optarch && cd build/gnucxx11_optarch && cmake -DBUILD_PACKAGES="Pipeline ParmDB pyparmdb" -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCASACORE_ROOT_DIR=/opt/lofarsoft -DBUILD_TESTING=OFF -DUSE_OPENMP=True ../../ && make -j1 && make install && cd / && rm -rf source
    RUN cd source && mkdir -p build/gnucxx11_optarch && cd build/gnucxx11_optarch && cmake -DPORTABLE -DBUILD_PACKAGES="Pipeline ParmDB pyparmdb" -DCMAKE_INSTALL_PREFIX=/opt/lofarsoft -DCASACORE_ROOT_DIR=/opt/lofarsoft -DBUILD_TESTING=OFF -DUSE_OPENMP=True ../../ && make -j1 && make install && cd / && rm -rf source
    # install factor 2
    RUN cd / && git clone https://github.com/lofar-astron/factor.git && cd factor && export PYTHONPATH=/opt/lofarsoft/lib/python2.7/site-packages/ && python setup.py install --prefix=/opt/lofarsoft && cd / && rm -rf factor
    ......
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