diff --git a/steps/GenericParsetGeneratorStep.cwl b/steps/GenericParsetGeneratorStep.cwl index fc7ce6da615068e4a5b49b2162190c62f9a4f5b4..33f0be7d8a381b694743b4dbc98802ef9489280f 100644 --- a/steps/GenericParsetGeneratorStep.cwl +++ b/steps/GenericParsetGeneratorStep.cwl @@ -1,22 +1,31 @@ class: CommandLineTool cwlVersion: v1.0 -id: GenericParsetGeneratorStep -baseCommand: [python, -c, 'import sys; print(sys.argv)'] - +$namespaces: + sbg: 'https://www.sevenbridges.com/' +id: _generic_parset_generator_step +baseCommand: + - python + - -c + - "import sys; print(sys.argv[1:])" inputs: - id: step_name type: string - doc: "name of the DPPP step" - + inputBinding: + position: 1 + doc: name of the DPPP step - id: step_type type: string - doc: "type of the DPPP step" - + inputBinding: + position: 2 + doc: type of the DPPP step - id: step_arguments - type: array<string> - doc: "List of key=value parameters to pass" + type: 'string[]' + inputBinding: + position: 3 + doc: List of key=value parameters to pass outputs: - - id: output_file - type: File - doc: "Parset output file" + output_file: + doc: Parset output file + type: stdout +