From c8e6abcd2c8fb9d3b059681014186661945b7295 Mon Sep 17 00:00:00 2001
From: mancini <mancini@astron.nl>
Date: Fri, 25 Oct 2019 16:25:14 +0200
Subject: [PATCH] Invalid steps list
Former-commit-id: 41564b903b2219f1b0627875d64814e243457b50
---
.gitlab-ci.yml | 14 ++++++++------
1 file changed, 8 insertions(+), 6 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 16c1a96b..4f4ccff8 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -6,7 +6,9 @@ variables:
stages:
- validate_cwl_scripts
- - test
+ - test_steps
+ - integration_test
+
before_script:
# - python3 -V # Print out python version for debugging
@@ -60,7 +62,7 @@ NDPPP:
stage: test_steps
allow_failure: true
script:
- - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH steps/DPPP.cwl test_jobs/NDPPP.json
+ - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH steps/DPPP.cwl test_jobs/NDPPP.json
aoflagger:
stage: test_steps
@@ -79,7 +81,7 @@ interpolate_visibilities:
allow_failure: true
script:
- cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH steps/interpolate_visibilities.cwl test_jobs/interpolate_visibilities.json
-
+
blsmooth:
stage: test_steps
allow_failure: true
@@ -87,12 +89,12 @@ blsmooth:
- cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH steps/blsmooth.cwl test_jobs/blsmooth.json
-prefactor_calibrator:
+prefactor_calibrator:
stage: integration_test
script:
- cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH prefactor_calibrator.cwl test_jobs/integration_test_prefactor_calibrator.json
-flag_average:
+flag_average:
stage: integration_test
- script:
+ script:
- cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH test_workflow/flag_average.cwl --msin=/data/L570745_SB001_uv_first10.MS
--
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