diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 16c1a96b40c4baa7286b4218656bd7fdf412362f..4f4ccff82efc4fb7793a9cb8d516f01a5824a66b 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -6,7 +6,9 @@ variables:
 
 stages:
   - validate_cwl_scripts
-  - test
+  - test_steps
+  - integration_test
+
 
 before_script:
 #  - python3 -V  # Print out python version for debugging
@@ -60,7 +62,7 @@ NDPPP:
   stage: test_steps
   allow_failure: true
   script:
-    - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH steps/DPPP.cwl test_jobs/NDPPP.json 
+    - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH steps/DPPP.cwl test_jobs/NDPPP.json
 
 aoflagger:
   stage: test_steps
@@ -79,7 +81,7 @@ interpolate_visibilities:
   allow_failure: true
   script:
     - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH steps/interpolate_visibilities.cwl test_jobs/interpolate_visibilities.json
-  
+
 blsmooth:
   stage: test_steps
   allow_failure: true
@@ -87,12 +89,12 @@ blsmooth:
     - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH steps/blsmooth.cwl test_jobs/blsmooth.json
 
 
-prefactor_calibrator: 
+prefactor_calibrator:
   stage: integration_test
   script:
     - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH --preserve-environment PYTHONPATH prefactor_calibrator.cwl test_jobs/integration_test_prefactor_calibrator.json
 
-flag_average: 
+flag_average:
   stage: integration_test
-  script: 
+  script:
     - cwltool --no-container --preserve-environment LD_LIBRARY_PATH --preserve-environment PATH test_workflow/flag_average.cwl --msin=/data/L570745_SB001_uv_first10.MS