diff --git a/.gitignore b/.gitignore index 6ada2877b3453550a6cec11b68ffad30847f84bf..b0502826fa48314208d9ccc2a7342bd20769c0c3 100644 --- a/.gitignore +++ b/.gitignore @@ -1,5 +1,6 @@ test_data/*.MS Docker/scripts +Docker/prefactor *.sif # Byte-compiled / optimized / DLL files __pycache__/ diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 40f52ecb701b4a0cc0edd3491d2f340ad6aed9b0..0efe8139e9797ac32568180278f4bb0a6d522268 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -59,7 +59,7 @@ blsmooth: pol_align: stage: integration_test script: - - cwltool --no-container subworkflows/pol_align.cwl test_jobs/pol_align.json + - cwltool --no-container subworkflow/pol_align.cwl test_jobs/pol_align.json prefactor_calibrator: stage: integration_test diff --git a/Docker/Dockerfile b/Docker/Dockerfile index 7b8b78a8b7f7c7fff4f642458082b1559993bbfb..b2d0d68f506300c9c3891a932d91d146288a4974 100644 --- a/Docker/Dockerfile +++ b/Docker/Dockerfile @@ -1,10 +1,10 @@ FROM lofareosc/lofar-pipeline:latest - +USER root COPY prefactor/scripts/* /opt/lofar/scripts/ COPY prefactor/skymodels/* /data/skymodels/ COPY prefactor/rfistrategies/* /data/rfistrategies/ COPY prefactor/solutions/ /data/solutions/* - +RUN apt update && apt install vim RUN ln -sf /opt/lofar/scripts/* /usr/local/bin/ RUN chmod +rx /usr/local/bin/*