diff --git a/workflows/HBA.cwl b/workflows/HBA.cwl deleted file mode 100644 index b5fba0880bbe30a0ef985a972ae226d150258510..0000000000000000000000000000000000000000 --- a/workflows/HBA.cwl +++ /dev/null @@ -1,96 +0,0 @@ -class: Workflow -cwlVersion: v1.0 -id: HBA -label: HBA.cwl -$namespaces: - sbg: 'https://www.sevenbridges.com/' -inputs: - - id: msin_calibrator - type: 'Directory[]' - 'sbg:x': -245 - 'sbg:y': -44 - - id: min_separation_Ateam - type: float - default: 30 - 'sbg:x': -265 - 'sbg:y': -153 - - id: filter_baseline - type: string - default: '*&' - 'sbg:x': 145 - 'sbg:y': 85 - - id: flag_baselines - type: string - default: '[]' - 'sbg:x': 9 - 'sbg:y': 232 - - id: process_baselines_cal - type: string - default: '*&' - 'sbg:x': -320 - 'sbg:y': 220 - - id: raw_data - type: boolean - default: false - 'sbg:x': 258 - 'sbg:y': -49 - - id: memoryperc - type: int - default: 90 - 'sbg:x': 206 - 'sbg:y': 212 - - id: avg_timeresolution - type: float - default: 4.0 - 'sbg:x': -534 - 'sbg:y': 175 - - id: avg_freqresolution - type: string - default: '48.82kHz' - 'sbg:x': -459 - 'sbg:y': -47 - - id: demix - type: boolean - 'sbg:x': 255 - 'sbg:y': 96 - - id: demix_timestep - type: int - default: 16 - 'sbg:x': 92 - 'sbg:y': 158 - - id: demix_freqstep - type: boolean - default: 16 - 'sbg:x': -387 - 'sbg:y': 103 - - id: demix_target - type: string - default: '' - 'sbg:x': -70 - 'sbg:y': 157 - - id: demix_sources - type: string - default: '[CasA,CygA]' - 'sbg:x': -182 - 'sbg:y': 135 -outputs: - - id: solutions - outputSource: - - prefactor/solutions - type: File - 'sbg:x': 99 - 'sbg:y': -44 -steps: - - id: prefactor - in: - - id: msin - source: - - msin_calibrator - out: - - id: solutions - run: ./prefactor.cwl - label: prefactor.cwl - 'sbg:x': -72.39886474609375 - 'sbg:y': -44.5 -requirements: - - class: SubworkflowFeatureRequirement diff --git a/workflows/HBA_calibrator.cwl b/workflows/HBA_calibrator.cwl new file mode 100644 index 0000000000000000000000000000000000000000..04dcaede5f9ca54b385167cf1472cae7055fd3af --- /dev/null +++ b/workflows/HBA_calibrator.cwl @@ -0,0 +1,32 @@ +class: Workflow +cwlVersion: v1.0 +id: _h_b_a +label: HBA.cwl +$namespaces: + sbg: 'https://www.sevenbridges.com/' +inputs: + - id: msin_calibrator + type: 'Directory[]' + 'sbg:x': -245 + 'sbg:y': -44 +outputs: + - id: solutions + outputSource: + - prefactor/solutions + type: File + 'sbg:x': 99 + 'sbg:y': -44 +steps: + - id: prefactor + in: + - id: msin + source: + - msin_calibrator + out: + - id: solutions + run: ./prefactor_calibrator.cwl + label: prefactor_calibrator + 'sbg:x': -72.39886474609375 + 'sbg:y': -44.5 +requirements: + - class: SubworkflowFeatureRequirement diff --git a/workflows/prefactor.cwl b/workflows/prefactor.cwl deleted file mode 100644 index c9fdcecd8d1c399f2abda18cc3d94bf182cd62f0..0000000000000000000000000000000000000000 --- a/workflows/prefactor.cwl +++ /dev/null @@ -1,42 +0,0 @@ -class: Workflow -cwlVersion: v1.0 -id: prefactor -label: prefactor.cwl -$namespaces: - sbg: 'https://www.sevenbridges.com/' -inputs: - - id: msin - type: 'Directory[]' - 'sbg:x': -708.0858764648438 - 'sbg:y': -306 -outputs: - - id: solutions - outputSource: - - prefactor_target/solutions - type: File - 'sbg:x': -169.21875 - 'sbg:y': -319.5 -steps: - - id: prefactor_target - in: - - id: cal_solutions - source: prefactor_calibrator/outh5parm - out: - - id: solutions - run: ./prefactor_target.cwl - label: prefactor_target - 'sbg:x': -345 - 'sbg:y': -321 - - id: prefactor_calibrator - in: - - id: msin - source: - - msin - out: - - id: outh5parm - run: ./prefactor_calibrator.cwl - label: prefactor_calibrator - 'sbg:x': -520 - 'sbg:y': -324 -requirements: - - class: SubworkflowFeatureRequirement