From 23434d25a317d13dbaeec1cace82c86d2ec87c84 Mon Sep 17 00:00:00 2001
From: mancini <mancini@astron.nl>
Date: Wed, 2 Oct 2019 16:17:03 +0200
Subject: [PATCH] Add validation step and cwl-runner
---
.gitlab-ci.yml | 11 ++++++++---
1 file changed, 8 insertions(+), 3 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 26c66e0c..da28e5b6 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -14,17 +14,22 @@ before_script:
- pip install virtualenv
- virtualenv venv
- source venv/bin/activate
- - pip install cwltool
+ - pip install cwltool cwl-runner
- cd test_data
- tar -xvf ${TEST_DATASET_NAME}
- cd $CI_PROJECT_DIR
after_script:
- echo "All done"
-
+
+validate_cwl_scripts:
+ stage: validate_cwl_scripts
+ script:
+ - for file in `find . -name '*.cwl'`; do cwltool --validate $file; done
+ allow_failure: true
test_DPPP_step:
stage: test
script:
- pwd
- - cwltool steps/DPPP.cwl msin=test_data/L570745_SB000_uv_first10.MS
+ - cwl-runner steps/DPPP.cwl msin=test_data/L570745_SB000_uv_first10.MS
--
GitLab