From 00ec4cebc63c2bd4a0b70f42c0ab4df05def2d7d Mon Sep 17 00:00:00 2001
From: alex <alex@tls-tautenburg.de>
Date: Fri, 21 Oct 2022 13:07:23 +0000
Subject: [PATCH] Moving back to recent master of losoto and newest numpy
---
docs/source/running.rst | 4 ++--
setup.py | 4 ++--
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/docs/source/running.rst b/docs/source/running.rst
index bb7a0ac8..eecdc21f 100644
--- a/docs/source/running.rst
+++ b/docs/source/running.rst
@@ -181,14 +181,14 @@ Typical reasons for which you would like to run **LINC** with a cached Singulari
* when running into a Docker pull limit.
* when compute nodes do not have an outbound connection to the internet or any similar firewall restrictions.
-In such cases you need to set a special CWL environment variable to make use of it:
+In such cases you need to set a special CWL environment variable to make use of it::
$ export CWL_SINGULARITY_CACHE=<cachedir>
$ export SINGULARITY_TMPDIR=<cachedir>/tmp
where ``<cachedir>`` is your chosen location of the Singularity image. When running **LINC**, the location of the ``<cachedir>`` should be visible from all compute nodes or machines you want to use. Once set simply restart your pipeline with ``--singularity`` and the image should be put into the right directory and be used for all steps.
Setting ``$SINGULARITY_TMPDIR`` is optional and avoids temporary mounting of the images in your ``/tmp``-directory. This is particularly helpful if your ``/tmp``-directory does not have much disk space.
-If you need to update your **LINC** Singularity image, simply remove the ``astronrd_linc.sif`` file in your ``<cachedir>`` and clean the Singularity cache:
+If you need to update your **LINC** Singularity image, simply remove the ``astronrd_linc.sif`` file in your ``<cachedir>`` and clean the Singularity cache::
$ singularity cache clean
diff --git a/setup.py b/setup.py
index 83e255c2..a77f0895 100644
--- a/setup.py
+++ b/setup.py
@@ -35,8 +35,8 @@ setup(
'Topic :: Scientific/Engineering :: Astronomy'],
platforms='any',
install_requires=[
- 'aplpy', 'astropy', 'bdsf', 'h5py', 'losoto==2.2.1', 'lsmtool',
- 'matplotlib', 'numpy<1.23.0', 'python-casacore', 'RMextract', 'scipy'],
+ 'aplpy', 'astropy', 'bdsf', 'h5py', 'losoto', 'lsmtool',
+ 'matplotlib', 'numpy', 'python-casacore', 'RMextract', 'scipy'],
scripts=glob.glob('scripts/*'),
data_files=data_files,
# explicitly declare packages so setuptools does not attempt auto discovery
--
GitLab